STRINGSTRING
LOC102234823 LOC102234823 LOC102235279 LOC102235279 flt1 flt1 tfam tfam LOC102221045 LOC102221045 ndufa1 ndufa1 mrpl53 mrpl53 LOC102233533 LOC102233533 ndufs5 ndufs5 LOC102233723 LOC102233723 ndufb5 ndufb5 lyrm7 lyrm7 lrpprc lrpprc tfb2m tfb2m rars2 rars2 chchd1 chchd1 xrcc5 xrcc5 taf1c taf1c ptcd3 ptcd3 ndufaf1 ndufaf1 SDHB SDHB foxred1 foxred1 ndufs2 ndufs2 mrps31 mrps31 fastkd1 fastkd1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102234823Cytochrome c oxidase assembly factor COX18. (324 aa)
LOC102235279Tyrosine-protein kinase receptor. (1386 aa)
flt1Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1429 aa)
tfamTranscription factor A, mitochondrial. (292 aa)
LOC102221045Tyrosine-protein kinase receptor. (1416 aa)
ndufa1Uncharacterized protein. (99 aa)
mrpl53Mitochondrial ribosomal protein L53. (108 aa)
LOC102233533Translational activator of mitochondrially encoded cytochrome c oxidase I. (294 aa)
ndufs5NADH:ubiquinone oxidoreductase subunit S5. (106 aa)
LOC102233723Colony stimulating factor 1 receptor, a. (979 aa)
ndufb5NADH:ubiquinone oxidoreductase subunit B5. (185 aa)
lyrm7LYR motif containing 7; Belongs to the complex I LYR family. (104 aa)
lrpprcLeucine-rich pentatricopeptide repeat containing. (1415 aa)
tfb2mrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (447 aa)
rars2Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family. (579 aa)
chchd1Coiled-coil-helix-coiled-coil-helix domain containing 1. (122 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (722 aa)
taf1cWu:fj64h06. (929 aa)
ptcd3Pentatricopeptide repeat domain 3. (542 aa)
ndufaf1NADH:ubiquinone oxidoreductase complex assembly factor 1. (304 aa)
SDHBSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (283 aa)
foxred1FAD-dependent oxidoreductase domain containing 1. (515 aa)
ndufs2NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family. (475 aa)
mrps31Mitochondrial ribosomal protein S31. (376 aa)
fastkd1FAST kinase domains 1. (830 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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