11 items (Xiphophorus maculatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ccnd1	Cyclin D1; Belongs to the cyclin family. (292 aa)
	e2f4	E2F transcription factor 4. (389 aa)
	lrp6	Low density lipoprotein receptor-related protein 6. (1610 aa)
	LOC102237505	Death-domain associated protein. (723 aa)
	Meioc	Uncharacterized protein. (219 aa)
	DTX1	Deltex E3 ubiquitin ligase 1. (642 aa)
	fam171a2	Family with sequence similarity 171 member A2b. (824 aa)
	grn	Granulin b. (742 aa)
	dll1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (806 aa)
	dvl1	Dishevelled segment polarity protein 1a. (720 aa)
	SMAD4	Mothers against decapentaplegic homolog. (512 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102237505	SMAD4	ENSXMAP00000007103	ENSXMAP00000031130	Death-domain associated protein.	Mothers against decapentaplegic homolog.	0.437
SMAD4	LOC102237505	ENSXMAP00000031130	ENSXMAP00000007103	Mothers against decapentaplegic homolog.	Death-domain associated protein.	0.437
SMAD4	e2f4	ENSXMAP00000031130	ENSXMAP00000001972	Mothers against decapentaplegic homolog.	E2F transcription factor 4.	0.835
ccnd1	e2f4	ENSXMAP00000001485	ENSXMAP00000001972	Cyclin D1; Belongs to the cyclin family.	E2F transcription factor 4.	0.552
dvl1	lrp6	ENSXMAP00000032053	ENSXMAP00000002816	Dishevelled segment polarity protein 1a.	Low density lipoprotein receptor-related protein 6.	0.826
e2f4	SMAD4	ENSXMAP00000001972	ENSXMAP00000031130	E2F transcription factor 4.	Mothers against decapentaplegic homolog.	0.835
e2f4	ccnd1	ENSXMAP00000001972	ENSXMAP00000001485	E2F transcription factor 4.	Cyclin D1; Belongs to the cyclin family.	0.552
lrp6	dvl1	ENSXMAP00000002816	ENSXMAP00000032053	Low density lipoprotein receptor-related protein 6.	Dishevelled segment polarity protein 1a.	0.826