(17 nodes) Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including ... network (Xiphophorus maculatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cep350	Centrosomal protein 350. (2525 aa)
	LOC102225223	Uncharacterized protein. (948 aa)
	dctn1	Dynactin 1b. (1249 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (952 aa)
	ENSXMAP00000037133	Uncharacterized protein. (357 aa)
	clip4	CAP-Gly domain containing linker protein family member 4. (757 aa)
	clip1	CAP-GLY domain containing linker protein 1a. (2206 aa)
	clip2	CAP-GLY domain containing linker protein 2. (1024 aa)
	LOC111608170	Si:ch211-175f12.2. (229 aa)
	tbce	Tubulin folding cofactor E. (521 aa)
	clip3	CAP-GLY domain containing linker protein 3. (610 aa)
	LOC102237530	Kinesin family member 13Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1728 aa)
	LOC102231502	Cylindromatosis (turban tumor syndrome), b. (712 aa)
	LOC102224407	Dynactin 1a. (1265 aa)
	LOC102233658	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (766 aa)
	tbcb	Tubulin folding cofactor B. (246 aa)
	kif13b	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1748 aa)

Your Current Organism:

Xiphophorus maculatus

NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSXMAP00000037133	LOC102224407	ENSXMAP00000037133	ENSXMAP00000008974	Uncharacterized protein.	Dynactin 1a.	0.640
ENSXMAP00000037133	dctn1	ENSXMAP00000037133	ENSXMAP00000040949	Uncharacterized protein.	Dynactin 1b.	0.640
LOC102224407	ENSXMAP00000037133	ENSXMAP00000008974	ENSXMAP00000037133	Dynactin 1a.	Uncharacterized protein.	0.640
LOC102224407	clip1	ENSXMAP00000008974	ENSXMAP00000029309	Dynactin 1a.	CAP-GLY domain containing linker protein 1a.	0.657
LOC102224407	clip2	ENSXMAP00000008974	ENSXMAP00000015357	Dynactin 1a.	CAP-GLY domain containing linker protein 2.	0.640
LOC102225223	cep350	ENSXMAP00000001310	ENSXMAP00000019046	Uncharacterized protein.	Centrosomal protein 350.	0.491
LOC102225223	clip3	ENSXMAP00000001310	ENSXMAP00000013047	Uncharacterized protein.	CAP-GLY domain containing linker protein 3.	0.523
LOC102225223	clip4	ENSXMAP00000001310	ENSXMAP00000035577	Uncharacterized protein.	CAP-Gly domain containing linker protein family member 4.	0.523
LOC102231502	cep350	ENSXMAP00000009654	ENSXMAP00000019046	Cylindromatosis (turban tumor syndrome), b.	Centrosomal protein 350.	0.520
LOC102231502	clip3	ENSXMAP00000009654	ENSXMAP00000013047	Cylindromatosis (turban tumor syndrome), b.	CAP-GLY domain containing linker protein 3.	0.538
LOC102231502	clip4	ENSXMAP00000009654	ENSXMAP00000035577	Cylindromatosis (turban tumor syndrome), b.	CAP-Gly domain containing linker protein family member 4.	0.538
LOC102233658	cep350	ENSXMAP00000006433	ENSXMAP00000019046	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	Centrosomal protein 350.	0.520
LOC102233658	clip3	ENSXMAP00000006433	ENSXMAP00000013047	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	CAP-GLY domain containing linker protein 3.	0.538
LOC102233658	clip4	ENSXMAP00000006433	ENSXMAP00000035577	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	CAP-Gly domain containing linker protein family member 4.	0.538
cep350	LOC102225223	ENSXMAP00000019046	ENSXMAP00000001310	Centrosomal protein 350.	Uncharacterized protein.	0.491
cep350	LOC102231502	ENSXMAP00000019046	ENSXMAP00000009654	Centrosomal protein 350.	Cylindromatosis (turban tumor syndrome), b.	0.520
cep350	LOC102233658	ENSXMAP00000019046	ENSXMAP00000006433	Centrosomal protein 350.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.520
cep350	cyld	ENSXMAP00000019046	ENSXMAP00000037932	Centrosomal protein 350.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.520
clip1	LOC102224407	ENSXMAP00000029309	ENSXMAP00000008974	CAP-GLY domain containing linker protein 1a.	Dynactin 1a.	0.657
clip1	dctn1	ENSXMAP00000029309	ENSXMAP00000040949	CAP-GLY domain containing linker protein 1a.	Dynactin 1b.	0.656