STRINGSTRING
rfc5 rfc5 lig1 lig1 pold3 pold3 rfc1 rfc1 RPA1 RPA1 exo1 exo1 pold1 pold1 pold4 pold4 msh2 msh2 rpa2 rpa2 pcna pcna pms2 pms2 pold2 pold2 ssbp1 ssbp1 mlh1 mlh1 rfc2 rfc2 rfc4 rfc4 rpa3 rpa3 LOC102230232 LOC102230232 rpa1 rpa1 MSH3 MSH3 rfc3 rfc3 msh6 msh6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rfc5Replication factor C (activator 1) 5. (335 aa)
lig1DNA ligase. (595 aa)
pold3Polymerase (DNA-directed), delta 3, accessory subunit. (438 aa)
rfc1Replication factor C subunit 1. (1195 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (700 aa)
exo1Exonuclease 1. (777 aa)
pold1DNA polymerase. (1105 aa)
pold4Si:dkey-28b4.7. (108 aa)
msh2DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (937 aa)
rpa2Replication protein A2. (278 aa)
pcnaProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
pms2PMS1 homolog 2, mismatch repair system component. (826 aa)
pold2Polymerase (DNA directed), delta 2, regulatory subunit. (528 aa)
ssbp1Single-stranded DNA binding protein 1. (147 aa)
mlh1MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli). (754 aa)
rfc2Replication factor C (activator 1) 2. (357 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
rpa3Replication protein A3. (122 aa)
LOC102230232RPA_C domain-containing protein. (247 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
MSH3DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1112 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
msh6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1376 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
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