STRINGSTRING
atg16l1 atg16l1 pik3r4 pik3r4 wipi2 wipi2 atg10 atg10 Mtor Mtor atg2a atg2a atg4b atg4b atg13 atg13 LOC102229002 LOC102229002 ulk2 ulk2 LOC102235796 LOC102235796 ppp2ca ppp2ca LOC102231511 LOC102231511 LOC102223777 LOC102223777 atg3 atg3 atg9a atg9a becn1 becn1 LOC102232828 LOC102232828 atg4c atg4c LOC102218600 LOC102218600 atg12 atg12 atg101 atg101 igbp1 igbp1 gabarapl2 gabarapl2 atg5 atg5 pik3c3 pik3c3 rptor rptor Atg2b Atg2b mlst8 mlst8 ppp2cb ppp2cb atg7 atg7 gabarap gabarap WIPI1 WIPI1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atg16l1ATG16 autophagy related 16-like 1 (S. cerevisiae). (603 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (1325 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (427 aa)
atg10ATG10 autophagy related 10 homolog (S. cerevisiae). (238 aa)
MtorSerine/threonine-protein kinase TOR. (1011 aa)
atg2aAutophagy related 2A. (1998 aa)
atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (445 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (538 aa)
LOC102229002Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (809 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1041 aa)
LOC102235796Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (499 aa)
ppp2caSerine/threonine-protein phosphatase. (309 aa)
LOC102231511Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (456 aa)
LOC102223777Serine/threonine-protein phosphatase. (309 aa)
atg3Autophagy-related protein 3. (315 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (853 aa)
becn1Beclin 1, autophagy related. (448 aa)
LOC102232828WD repeat domain, phosphoinositide interacting 1. (451 aa)
atg4cCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (477 aa)
LOC102218600Zgc:92606. (117 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (135 aa)
atg101Autophagy related 101. (215 aa)
igbp1Immunoglobulin (CD79A) binding protein 1. (358 aa)
gabarapl2GABA(A) receptor-associated protein like 2. (116 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (326 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (879 aa)
rptorRegulatory associated protein of MTOR, complex 1. (1381 aa)
Atg2bAutophagy related 2B. (292 aa)
mlst8MTOR associated protein, LST8 homolog (S. cerevisiae). (326 aa)
ppp2cbSerine/threonine-protein phosphatase. (309 aa)
atg7ATG7 autophagy related 7 homolog (S. cerevisiae). (720 aa)
gabarapGABA(A) receptor-associated protein b. (122 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (444 aa)
Your Current Organism:
Xiphophorus maculatus
NCBI taxonomy Id: 8083
Other names: Platypoecilus maculatus, X. maculatus, southern platyfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.