STRINGSTRING
CED56675.1 CED56675.1 CED56711.1 CED56711.1 CED56727.1 CED56727.1 CED56759.1 CED56759.1 CED56871.1 CED56871.1 CED56898.1 CED56898.1 CED56910.1 CED56910.1 CED56922.1 CED56922.1 gcvP gcvP gcvH gcvH CED57093.1 CED57093.1 CED57094.1 CED57094.1 CED57139.1 CED57139.1 pykA pykA ppaC ppaC ackA ackA CED57598.1 CED57598.1 CED57837.1 CED57837.1 CED70121.1 CED70121.1 fadA fadA fadB fadB glnA glnA frdD frdD frdC frdC frdB frdB CED70361.1 CED70361.1 ppc ppc CED70394.1 CED70394.1 maeB maeB CED70433.1 CED70433.1 ilvI ilvI ilvH ilvH pykF pykF CED70440.1 CED70440.1 zapE zapE CED70474.1 CED70474.1 petB petB CED70476.1 CED70476.1 aceE aceE aceF aceF lpdA lpdA acnB acnB CED70603.1 CED70603.1 oadG oadG CED70611.1 CED70611.1 CED70612.1 CED70612.1 CED70614.1 CED70614.1 yeiG yeiG adhC adhC CED70720.1 CED70720.1 adhC-2 adhC-2 CED70722.1 CED70722.1 tadA-2 tadA-2 gltA gltA sdhC sdhC sdhD sdhD sdhA sdhA sdhB sdhB sucA sucA sucB sucB sucC sucC sucD sucD pta pta ackA-2 ackA-2 CED70900.1 CED70900.1 CED70901.1 CED70901.1 CED70902.1 CED70902.1 CED70903.1 CED70903.1 CED70904.1 CED70904.1 CED70905.1 CED70905.1 acpP acpP CED70907.1 CED70907.1 CED70908.1 CED70908.1 CED70909.1 CED70909.1 CED70910.1 CED70910.1 CED70912.1 CED70912.1 CED70913.1 CED70913.1 CED70914.1 CED70914.1 CED70915.1 CED70915.1 CED70916.1 CED70916.1 CED70917.1 CED70917.1 fabG fabG fabF fabF CED70926.1 CED70926.1 fabV fabV adhE adhE CED71044.1 CED71044.1 CED71063.1 CED71063.1 ldhA ldhA CED71215.1 CED71215.1 CED71252.1 CED71252.1 adhB adhB fdhA fdhA fdhB fdhB fdnI fdnI fabA fabA gdhB gdhB CED71487.1 CED71487.1 CED71499.1 CED71499.1 sfcA sfcA pflB pflB pflA pflA fadH fadH CED71851.1 CED71851.1 menE menE menC menC menB menB menH menH menD menD menF menF accD accD fabB fabB fadD fadD purU purU CED71898.1 CED71898.1 CED71899.1 CED71899.1 CED71900.1 CED71900.1 CED71901.1 CED71901.1 CED71902.1 CED71902.1 CED71903.1 CED71903.1 CED71904.1 CED71904.1 CED71905.1 CED71905.1 CED71906.1 CED71906.1 CED71907.1 CED71907.1 CED71921.1 CED71921.1 mltG mltG pabC pabC fabF-2 fabF-2 acpV acpV fabG-2 fabG-2 fabD fabD fabH fabH plsX plsX CED71933.1 CED71933.1 icd icd fadJ fadJ fadI fadI fadE fadE accA accA aceA aceA aceB aceB fdx-2 fdx-2 gltB gltB CED72267.1 CED72267.1 glsA glsA leuA leuA leuB leuB leuC leuC leuD leuD mdh mdh menA menA acs acs accB accB accC accC murI murI pckA pckA ilvC ilvC ilvG ilvG ilvM ilvM ilvD ilvD ilvA ilvA atpC atpC atpD atpD atpG atpG atpA atpA atpH atpH atpF atpF atpE atpE atpB atpB atpI atpI
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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CED56675.1Putative uncharacterized protein. (222 aa)
CED56711.1Putative zinc-containing alcohol dehydrogenase. (332 aa)
CED56727.1enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
CED56759.1Putative zinc-containing alcohol dehydrogenase. (324 aa)
CED56871.1Pyruvate formate lyase. (765 aa)
CED56898.16-phosphogluconate dehydrogenase, NAD-binding. (292 aa)
CED56910.1NAD-dependent formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1383 aa)
CED56922.1Putative ferredoxin. (387 aa)
gcvPGlycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (955 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (126 aa)
CED57093.1Aminomethyltransferase. (372 aa)
CED57094.1Putative uncharacterized MaoC domain protein. (227 aa)
CED57139.1Putative thioesterase; Similar to Escherichia coli Esterase YdiI UniProt:P77781 (136 aa) fasta scores: E()=5.3e-23, 48.148% id in 135 aa. The CDS appears to be truncated at the N-terminus. (141 aa)
pykAPyruvate kinase II; Belongs to the pyruvate kinase family. (481 aa)
ppaCManganese-dependent inorganic pyrophosphatase. (306 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)
CED57598.1Putative ferredoxin oxidoreductase. (343 aa)
CED57837.1Putative uncharacterized dehydrogenase. (222 aa)
CED70121.1Putative zinc-binding alcohol dehydrogenase. (326 aa)
fadAFatty oxidation complex beta subunit, 3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)
fadBFatty oxidation complex alpha subunit, enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (725 aa)
glnAGlutamine synthetase. (469 aa)
frdDFumarate reductase complex, membrane anchor subunit D; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (120 aa)
frdCFumarate reductase complex, membrane anchor subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (127 aa)
frdBFumarate reductase complex, iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (247 aa)
CED70361.1Fumarate reductase complex, flavoprotein subunit. (603 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (876 aa)
CED70394.1Dihydrolipoyl dehydrogenase (dihydrolipoamide dehydrogenase). (488 aa)
maeBNADP-dependent malic enzyme. (415 aa)
CED70433.1AMP-binding enzyme, putative long chain fatty acid Co-A ligase, acetyl-CoA synthetase. (609 aa)
ilvIAcetolactate synthase isozyme III large subunit. (573 aa)
ilvHAcetolactate synthase isozyme III small subunit. (164 aa)
pykFPyruvate kinase; Belongs to the pyruvate kinase family. (470 aa)
CED70440.1AMP-binding enzyme, putative long chain fatty acid Co-A ligase, acetyl-CoA synthetase. (515 aa)
zapEPutative ATPase; Reduces the stability of FtsZ polymers in the presence of ATP. (368 aa)
CED70474.1Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (202 aa)
petBCytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (422 aa)
CED70476.1Ubiquinol--cytochrome c reductase, cytochrome C1. (245 aa)
aceEPyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (887 aa)
aceFDihydrolipoyllysine-residue acetyltransferase component of pyruvat dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (625 aa)
lpdADihydrolipoamide dehydrogenase. (476 aa)
acnBAconitate hydratase 2 (citrate hydro-lyase 2); Belongs to the aconitase/IPM isomerase family. (862 aa)
CED70603.1Putative AMP-binding acetyl-CoA synthetase. (558 aa)
oadGOxaloacetate decarboxylase 1, subunit gamma; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation. (83 aa)
CED70611.1Oxaloacetate decarboxylase 2, subunit alpha. (594 aa)
CED70612.1Oxaloacetate decarboxylase, beta subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family. (376 aa)
CED70614.1Exported pepdidase, putative zinc protease. (950 aa)
yeiGPutative esterase; Serine hydrolase involved in the detoxification of formaldehyde. (280 aa)
adhCAlcohol dehydrogenase class 3; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (382 aa)
CED70720.1Sodium/dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (429 aa)
adhC-2Alcohol dehydrogenase class 3; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (382 aa)
CED70722.1HTH-type transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. (290 aa)
tadA-2tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (173 aa)
gltACitrate synthase; Belongs to the citrate synthase family. (429 aa)
sdhCSuccinate dehydrogenase cytochrome b556 subunit. (133 aa)
sdhDSuccinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (115 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (588 aa)
sdhBSuccinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (237 aa)
sucA2-oxoglutarate dehydrogenase E1 component. (938 aa)
sucBDihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (403 aa)
sucCsuccinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa)
sucDsuccinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa)
ptaPhosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (720 aa)
ackA-2Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)
CED70900.1FAD dependent oxidoreductase. (418 aa)
CED70901.1Putative O-methyltransferase. (359 aa)
CED70902.1Putative lipoprotein. (191 aa)
CED70903.1Putative uncharacterized protein. (242 aa)
CED70904.1Putative membrane accosiated acyltransferase. (265 aa)
CED70905.1Acyl carrier protein. (85 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family. (83 aa)
CED70907.1Membrane protein. (186 aa)
CED70908.1Putative uncharacterized AMP-binding enzyme. (455 aa)
CED70909.1Putative uncharacterized protein. (124 aa)
CED70910.1Putative glycosyl transferase. (563 aa)
CED70912.1Putative thioesterase. (150 aa)
CED70913.1Putative outer membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (206 aa)
CED70914.1Membrane protein. (778 aa)
CED70915.1Putative lipoprotein. (209 aa)
CED70916.1beta-ketoacyl-[ACP] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (396 aa)
CED70917.1beta-hydroxydecanoyl-ACP dehydrase. (156 aa)
fabG3-oxoacyl-[acyl-carrier-protein] reductase. (241 aa)
fabF3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (411 aa)
CED70926.1Putative lipoprotein. (409 aa)
fabVPutative reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (400 aa)
adhEAldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (883 aa)
CED71044.1Putatuve alcohol dehydrogenase. (326 aa)
CED71063.1MaoC domain protein. (152 aa)
ldhAD-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (331 aa)
CED71215.16-phosphogluconate dehydrogenase. (298 aa)
CED71252.1Fumarate hydratase class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (508 aa)
adhBAlcohol dehydrogenase 2. (381 aa)
fdhAFormate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (951 aa)
fdhBFormate dehydrogenase iron-sulfur subunit. (202 aa)
fdnIFormate dehydrogenase, cytochrome B556 subunit. (339 aa)
fabA3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (172 aa)
gdhBNAD-dependent glutamate dehydrogenase. (1611 aa)
CED71487.1enoyl-CoA hydratase/isomerase. (268 aa)
CED71499.1Phosphoenolpyruvate synthase. (294 aa)
sfcANAD-dependent malic enzyme. (562 aa)
pflBFormate acetyltransferase 1. (758 aa)
pflAPyruvate formate-lyase 1 activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family. (245 aa)
fadH2,4-dienoyl-CoA reductase [NADPH]. (667 aa)
CED71851.1Membrane associated acyltransferase. (622 aa)
menEO-succinylbenzoate-CoA ligase. (466 aa)
menCO-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (324 aa)
menBNaphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA). (288 aa)
menHacyl-CoA thioester hydrolase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC). (264 aa)
menDMenaquinone biosynthesis protein MenD; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. (577 aa)
menFMenaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (440 aa)
accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (294 aa)
fabB3-ketoacyl-ACP synthase FabB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (403 aa)
fadDlong-chain-fatty-acid-CoA ligase. (560 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (277 aa)
CED71898.1Putative hydrolytic enzyme, alpha/beta hydrolase. (265 aa)
CED71899.1Putative uncharacterized protein. (289 aa)
CED71900.1Putative beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (380 aa)
CED71901.1Putative uncharacterized protein. (89 aa)
CED71902.1ABC-2 type transporter, ATP-binding protein. (388 aa)
CED71903.1ABC transporter, ATP-binding protein. (307 aa)
CED71904.1Membrane protein. (338 aa)
CED71905.1Putative DNA binding protein. (137 aa)
CED71906.1Putative 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III. (382 aa)
CED71907.1Membrane protein. (304 aa)
CED71921.1Putative TatD-related deoxyribonuclease. (256 aa)
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. (336 aa)
pabCAminodeoxychorismate lyase. (269 aa)
fabF-23-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (414 aa)
acpVAcyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. (77 aa)
fabG-23-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (245 aa)
fabDMalonyl CoA-acyl carrier protein transacylase. (307 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (317 aa)
plsXFatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (342 aa)
CED71933.1Putative uncharacterized protein. (173 aa)
icdIsocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family. (742 aa)
fadJFatty acid oxidation complex alpha subunit [includes: enoyl-co hydratase; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. (698 aa)
fadI3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (442 aa)
fadEAcyl-coenzyme A dehydrogenase. (815 aa)
accAAcetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa)
aceAIsocitrate lyase. (442 aa)
aceBMalate synthase A; Belongs to the malate synthase family. (534 aa)
fdx-2Ferredoxin. (84 aa)
gltBGlutamate synthase, large subunit. (1515 aa)
CED72267.1Glutamate synthase, small subunit. (490 aa)
glsAGlutaminase; Belongs to the glutaminase family. (306 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (515 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (363 aa)
leuC3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (471 aa)
leuD3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. (311 aa)
menA1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. (302 aa)
acsAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (649 aa)
accBacetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (152 aa)
accCacetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (447 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (262 aa)
pckAPhosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (541 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (494 aa)
ilvGAcetolactate synthase isozyme II large subunit. (548 aa)
ilvMAcetolactate synthase small subunit. (81 aa)
ilvDDihydroxy-acid dehydratase; The CDS appears to have a deletion of 130 amino acid residues after codon 297 in comparison to orthologues; Belongs to the IlvD/Edd family. (618 aa)
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (510 aa)
atpCATP synthase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (140 aa)
atpDATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (467 aa)
atpGATP synthase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (288 aa)
atpAATP synthase alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (513 aa)
atpHATP synthase delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (177 aa)
atpFATP synthase B chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (154 aa)
atpEATP synthase c chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (85 aa)
atpBATP synthase A chain; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (265 aa)
atpIATP synthase protein I. (129 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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