STRINGSTRING
manA manA CED57017.1 CED57017.1 CED57018.1 CED57018.1 CED57019.1 CED57019.1 manA-2 manA-2 CED57021.1 CED57021.1 CED57023.1 CED57023.1 CED57024.1 CED57024.1 tktA tktA talB talB zwf zwf pgl pgl gnd gnd treB treB treA treA nagE nagE fruA fruA fruK fruK fruB fruB scrK scrK CED57707.1 CED57707.1 CED57708.1 CED57708.1 CED57768.1 CED57768.1 CED57769.1 CED57769.1 CED70127.1 CED70127.1 eda eda gap gap mtlR mtlR mtlD mtlD mtlA mtlA pfkA pfkA rpe rpe deoC deoC deoA deoA deoB deoB prs prs nagC nagC nagE-2 nagE-2 pgm pgm yeaD yeaD gap-2 gap-2 CED71140.1 CED71140.1 rbsK rbsK nagK nagK pdxB pdxB ptsG ptsG ptsH ptsH ptsI ptsI crr crr eno eno rpiA rpiA fbaA fbaA pgk pgk epd epd tktA-2 tktA-2 pgi pgi fbp fbp glpX glpX tpiA tpiA gpmI gpmI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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manAMannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (401 aa)
CED57017.1PTS system, IIC component. (623 aa)
CED57018.1PTS system, IIB component. (99 aa)
CED57019.1PTS system, IIA component. (261 aa)
manA-2Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family. (399 aa)
CED57021.1PTS system, IIBC component. (633 aa)
CED57023.1PTS system, permease-specific phosphorylation site EIIA component. (143 aa)
CED57024.1PTS system, fructose-like permease IIC component. (466 aa)
tktATransketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (663 aa)
talBTransaldolase B; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (316 aa)
zwfGlucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (500 aa)
pgl6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (238 aa)
gnd6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (482 aa)
treBPTS system, trehalose-specific EIIBC component. (474 aa)
treATrehalose-6-phosphate hydrolase. (556 aa)
nagEPTS system permease for N-acetylglucosamine and glucose. (487 aa)
fruAPTS system, fructose-specific IIBC component. (580 aa)
fruK1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. (327 aa)
fruBPTS system, fructose-specific IIA/FPR component. (378 aa)
scrKFructokinase. (308 aa)
CED57707.1PTS system, sucrose-specific EIIBC component. (457 aa)
CED57708.1Glycosyl hydrolase, Family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (486 aa)
CED57768.1Putative carbohydrate kinase, pfkB family. (312 aa)
CED57769.1Gluconate permease. (207 aa)
CED70127.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (462 aa)
edaKHG/KDPG aldolase. (211 aa)
gapGlyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (333 aa)
mtlRMannitol operon repressor (mannitol repressor protein). (176 aa)
mtlDMannitol-1-phosphate 5-dehydrogenase. (382 aa)
mtlAPTS system, mannitol-specific EIICBA component. (650 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (320 aa)
rpeRibulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (225 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily. (258 aa)
deoAThymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. (443 aa)
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (406 aa)
prsRibose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (332 aa)
nagCN-acetylglucosamine repressor. (404 aa)
nagE-2PTS permease for N-acetylglucosamine and glucose. (496 aa)
pgmPhosphoglucomutase. (548 aa)
yeaDPutative aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (291 aa)
gap-2Glyceraldehydes-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (330 aa)
CED71140.1Putative phosphomannomutase. (568 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (305 aa)
nagKN-acetyl-d-glucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P. (303 aa)
pdxBErythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. (376 aa)
ptsGPTS system, glucose-specific EIIBC component [includes: glucose permease IIC component; glucose-specific phosphotransferase enzyme II component]. (476 aa)
ptsHPhosphocarrier protein Hpr, histidine-containing protein (PTS system). (85 aa)
ptsIPhosphoenolpyruvate-protein phosphotransferase enzyme I (PTS system); General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (574 aa)
crrGlucose-specific phosphotransferase enzyme IIA component (PTS system). (169 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (432 aa)
rpiARibose-5-phosphate isomerase A (phosphoriboisomerase A); Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (218 aa)
fbaAFructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (358 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (387 aa)
epdD-erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate. (339 aa)
tktA-2Transketolase 1; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (664 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (550 aa)
fbpFructose-1,6-bisphosphatase; Belongs to the FBPase class 1 family. (336 aa)
glpXFructose-1,6-bisphosphatase class II GlpX. (335 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (256 aa)
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (516 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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