STRINGSTRING
gbpA gbpA nagZ nagZ chb chb CED70136.1 CED70136.1 chbP chbP exoI exoI CED70545.1 CED70545.1 CED71069.1 CED71069.1 CED71336.1 CED71336.1 chiA chiA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gbpAGlcNAc-binding protein A; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. Belongs to the GbpA family. (491 aa)
nagZBeta-hexosaminidase (beta-N-acetylhexosaminidase); Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (331 aa)
chbN,N'-diacetylchitobiase (chitobiase). (881 aa)
CED70136.1Putative beta-N-acetylhexosaminidase. (815 aa)
chbPChitobiose phosphorylase (glycosyl transferase). (801 aa)
exoIBeta-hexosaminidase (beta-N-acetylglucosaminidase). (634 aa)
CED70545.1Putative endochitinase. (572 aa)
CED71069.1Chitodextrinase. (1055 aa)
CED71336.1Chitinase. (569 aa)
chiAChitinase. (845 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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