STRINGSTRING
CED56686.1 CED56686.1 CED56718.1 CED56718.1 CED56821.1 CED56821.1 mshQ mshQ mshP mshP mshO mshO mshD mshD mshC mshC CED56936.1 CED56936.1 CED57043.1 CED57043.1 CED57171.1 CED57171.1 CED57199.1 CED57199.1 CED57260.1 CED57260.1 CED57455.1 CED57455.1 CED57456.1 CED57456.1 CED57572.1 CED57572.1 CED57912.1 CED57912.1 CED70176.1 CED70176.1 yihI yihI CED70178.1 CED70178.1 CED70194.1 CED70194.1 CED70271.1 CED70271.1 xpsE xpsE CED70273.1 CED70273.1 CED70274.1 CED70274.1 CED70275.1 CED70275.1 CED70276.1 CED70276.1 CED70277.1 CED70277.1 CED70278.1 CED70278.1 CED70279.1 CED70279.1 CED70280.1 CED70280.1 CED70281.1 CED70281.1 motX motX pilM pilM pilN pilN pilO pilO pilP pilP pilQ pilQ cca cca exeA exeA exeB exeB yacG yacG zapD zapD coaE coaE pilD pilD pilC pilC pilB pilB pilA pilA ampD ampD CED70597.1 CED70597.1 CED70644.1 CED70644.1 CED70645.1 CED70645.1 CED70646.1 CED70646.1 CED70647.1 CED70647.1 CED70648.1 CED70648.1 CED70676.1 CED70676.1 CED70873.1 CED70873.1 CED70990.1 CED70990.1 CED71313.1 CED71313.1 CED71386.1 CED71386.1 CED71593.1 CED71593.1 CED71652.1 CED71652.1 mshQ-2 mshQ-2 mshP-2 mshP-2 mshO-2 mshO-2 mshD-2 mshD-2 mshC-2 mshC-2 CED71866.1 CED71866.1 CED72022.1 CED72022.1 fliJ fliJ flgN flgN CED72066.1 CED72066.1 CED72067.1 CED72067.1 CED72068.1 CED72068.1 CED72117.1 CED72117.1 pilU pilU pilT pilT mshP-3 mshP-3 mshO-3 mshO-3 mshD-3 mshD-3 mshC-3 mshC-3 mshA mshA mshB mshB mshG mshG mshN mshN mshM mshM mshD-4 mshD-4 mshK mshK mshJ mshJ mshI mshI CED72403.1 CED72403.1 CED72430.1 CED72430.1 CED72548.1 CED72548.1 nudE nudE exeN exeN epsM epsM epsL epsL epsK epsK epsJ epsJ epsI epsI epsH epsH epsG epsG epsF epsF epsE epsE epsD epsD epsC epsC hslR hslR hslO hslO CED72657.1 CED72657.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CED56686.1Putative secretion protein. (170 aa)
CED56718.1Methyl-accepting chemotaxis protein, CheC-like family. (153 aa)
CED56821.1Putative zinc carboxypeptidase. (307 aa)
mshQMSHA biogenesis protein MshQ. (1235 aa)
mshPMSHA biogenesis protein MshP. (143 aa)
mshOMSHA biogenesis protein MshO. (267 aa)
mshDMSHA pilin protein MshD. (178 aa)
mshCMSHA pilin protein MshC. (175 aa)
CED56936.1V10 pilin. (173 aa)
CED57043.1Putative uncharacterized protein; Lack of similarity at the C-terminus in comparison to other proteins. (104 aa)
CED57171.1Putative uncharacterized protein. (189 aa)
CED57199.1Putative uncharacterized protein. (81 aa)
CED57260.1Putative uncharacterized protein. (146 aa)
CED57455.1Putative lipoprotein. (818 aa)
CED57456.1Long-chain fatty acid transport protein. (419 aa)
CED57572.1Methyl-accepting chemotaxis protein, CheC-like family. (153 aa)
CED57912.1Putative uncharacterized protein. (547 aa)
CED70176.1Putative uncharacterized protein. (214 aa)
yihIPutative uncharacterized protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family. (184 aa)
CED70178.1Putative exported protein. (163 aa)
CED70194.1Membrane protein. (178 aa)
CED70271.1General secretion pathway protein G. (132 aa)
xpsEGeneral secretion pathway protein E. (560 aa)
CED70273.1General secretion pathway protein F. (401 aa)
CED70274.1General secretion pathway protein. (151 aa)
CED70275.1Putative general secretion pathway protein; No significant database matches. (113 aa)
CED70276.1Putative uncharacterized general secretion pathway protein. (237 aa)
CED70277.1General secretion pathway protein K. (299 aa)
CED70278.1Putative general secretion pathway protein; No significant database matches. (379 aa)
CED70279.1Putative general secretion pathway protein; No significant database matches. (172 aa)
CED70280.1Putative general secretion pathway protein; No significant database matches. (166 aa)
CED70281.1General secretion pathway protein D. (709 aa)
motXSodium-type polar flagellar protein MotX. (210 aa)
pilMFimbrial assembly protein PilM. (332 aa)
pilNFimbrial assembly protein PilN. (193 aa)
pilOFimbrial assembly protein PilO. (195 aa)
pilPFimbrial assembly protein PilP. (173 aa)
pilQFimbrial assembly protein PilQ precursor. (573 aa)
ccaMultifunctional CCA protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. (407 aa)
exeAGeneral secretion pathway protein A. (517 aa)
exeBGeneral secretion pathway protein B. (220 aa)
yacGUPF0243 zinc-binding protein; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase. (69 aa)
zapDUPF0289 protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. (248 aa)
coaEdephospho-CoA kinase (dephosphocoenzyme a kinase); Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (206 aa)
pilDType IV prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (298 aa)
pilCType IV pilus assembly protein PilC. (412 aa)
pilBType IV pilus assembly protein PilB. (563 aa)
pilAType IV pilin PilA; Belongs to the N-Me-Phe pilin family. (141 aa)
ampDAmpD protein (N-acetylmuramoyl-L-alanine amidase). (183 aa)
CED70597.1PilZ domain containing protein. (782 aa)
CED70644.1Membrane protein. (157 aa)
CED70645.1Putative type IV pilin. (166 aa)
CED70646.1Membrane protein. (198 aa)
CED70647.1Membrane protein. (411 aa)
CED70648.1Putative type IV pilin. (141 aa)
CED70676.1Putative uncharacterized protein. (257 aa)
CED70873.1Membrane protein. (73 aa)
CED70990.1Putative lipoprotein. (278 aa)
CED71313.1Putative uncharacterized protein. (110 aa)
CED71386.1Putative uncharacterized protein. (163 aa)
CED71593.1Putative lipoprotein. (840 aa)
CED71652.1Putative membrane protein. (254 aa)
mshQ-2MSHA biogenesis protein MshQ. (2658 aa)
mshP-2MSHA biogenesis protein MshP. (136 aa)
mshO-2MSHA biogenesis protein MshO. (262 aa)
mshD-2MSHA pilin protein MshD. (188 aa)
mshC-2MSHA pilin protein MshC. (164 aa)
CED71866.1Integral membrane protein. (187 aa)
CED72022.1Putative type IV pilus assembly (PilZ) protein. (224 aa)
fliJPolar flagellar assembly protein FliJ. (146 aa)
flgNPolar flagellar FlgN. (142 aa)
CED72066.1Putative lipoprotein. (143 aa)
CED72067.1Putative lipoprotein. (211 aa)
CED72068.1Putative exported protein. (378 aa)
CED72117.1Putative exported protein. (420 aa)
pilUTwitching motility protein PilU, type II/IV secretion system protein. (367 aa)
pilTTwitching mobility protein PilT, type II/IV secretion system protein. (345 aa)
mshP-3Putative exported protein MshP. (145 aa)
mshO-3Putative exported protein MshO. (241 aa)
mshD-3Type IV pilus, MSHA pilin protein MshD. (197 aa)
mshC-3Type IV pilus, MSHA pilin protein MshC. (196 aa)
mshAType IV pilus, MSHA pilin protein MshA. (153 aa)
mshBType IV pilus, MSHA pilin protein MshB. (187 aa)
mshGType IV pilus, MSHA biogenesis protein MshG. (408 aa)
mshNType IV pilus, MSHA biogenesis protein MshN. (370 aa)
mshMType IV pilus, MSHA biogenesis protein MshM. (282 aa)
mshD-4Type IV pilus, MSHA biogenesis protein MshD. (550 aa)
mshKType IV pilus, MSHA biogenesis protein MshK. (110 aa)
mshJType IV pilus, MSHA biogenesis protein MshJ. (212 aa)
mshIType IV pilus, MSHA biogenesis protein MshI. (485 aa)
CED72403.1Putative uncharacterized protein. (291 aa)
CED72430.1Putative chemotactic response regulator, CheC. (153 aa)
CED72548.1Putative uncharacterized protein. (151 aa)
nudEADP compounds hydrolase NudE. (183 aa)
exeNGeneral secretion pathway protein N. (253 aa)
epsMGeneral secretion pathway protein M; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (162 aa)
epsLGeneral secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (416 aa)
epsKGeneral secretion pathway protein K. (347 aa)
epsJGeneral secretion pathway protein J. (225 aa)
epsIGeneral secretion pathway protein I. (126 aa)
epsHGeneral secretion pathway protein H precursor. (197 aa)
epsGGeneral secretion pathway protein G. (150 aa)
epsFGeneral secretion pathway protein F. (405 aa)
epsEGeneral secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (499 aa)
epsDGeneral secretion pathway protein D. (672 aa)
epsCGeneral secretion pathway protein C. (303 aa)
hslRHeat shock protein 15; Belongs to the HSP15 family. (133 aa)
hslO33 kda chaperonin (heat shock protein 33); Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. (291 aa)
CED72657.1Putative cell wall degradation enzyme. (356 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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