STRINGSTRING
mshN mshN mshM mshM mshD-4 mshD-4 mshJ mshJ mshI mshI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mshNType IV pilus, MSHA biogenesis protein MshN. (370 aa)
mshMType IV pilus, MSHA biogenesis protein MshM. (282 aa)
mshD-4Type IV pilus, MSHA biogenesis protein MshD. (550 aa)
mshJType IV pilus, MSHA biogenesis protein MshJ. (212 aa)
mshIType IV pilus, MSHA biogenesis protein MshI. (485 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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