Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CED71586.1 | dnaJ | AWOD_I_1512 | AWOD_I_1103 | Putative heat shock protein. | Chaperone protein DnaJ. | 0.860 |
| CED71586.1 | dnaJ-2 | AWOD_I_1512 | AWOD_I_2106 | Putative heat shock protein. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.861 |
| CED71586.1 | groL1 | AWOD_I_1512 | AWOD_I_2470 | Putative heat shock protein. | 60 kda chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.823 |
| CED71586.1 | groS1 | AWOD_I_1512 | AWOD_I_2471 | Putative heat shock protein. | 10 kDa chaperonin 1; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.754 |
| CED71586.1 | grpE | AWOD_I_1512 | AWOD_I_2108 | Putative heat shock protein. | Protein GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several roun [...] | 0.907 |
| CED71586.1 | hslU | AWOD_I_1512 | AWOD_I_0322 | Putative heat shock protein. | ATP-dependent hsl protease ATP-binding subunit HslU (heat shock protein HslU); ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.487 |
| CED71586.1 | hslV | AWOD_I_1512 | AWOD_I_0323 | Putative heat shock protein. | ATP-dependent protease HslV (heat shock protein HslV); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.482 |
| CED71586.1 | lon | AWOD_I_1512 | AWOD_I_0765 | Putative heat shock protein. | ATP-dependent protease LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.504 |
| CED71586.1 | vasG | AWOD_I_1512 | AWOD_II_0120 | Putative heat shock protein. | Type VI secretion ATPase, ClpB protein; Belongs to the ClpA/ClpB family. | 0.709 |
| CED71586.1 | vasG-2 | AWOD_I_1512 | AWOD_I_0989 | Putative heat shock protein. | Chaperone ClpB; Belongs to the ClpA/ClpB family. | 0.709 |
| dnaJ | CED71586.1 | AWOD_I_1103 | AWOD_I_1512 | Chaperone protein DnaJ. | Putative heat shock protein. | 0.860 |
| dnaJ | dnaK | AWOD_I_1103 | AWOD_I_2107 | Chaperone protein DnaJ. | Chaperone protein DnaK (heat shock protein 70); Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.973 |
| dnaJ | groL1 | AWOD_I_1103 | AWOD_I_2470 | Chaperone protein DnaJ. | 60 kda chaperonin 1; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.786 |
| dnaJ | groS1 | AWOD_I_1103 | AWOD_I_2471 | Chaperone protein DnaJ. | 10 kDa chaperonin 1; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.701 |
| dnaJ | grpE | AWOD_I_1103 | AWOD_I_2108 | Chaperone protein DnaJ. | Protein GrpE (heat shock protein); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several roun [...] | 0.959 |
| dnaJ | hslU | AWOD_I_1103 | AWOD_I_0322 | Chaperone protein DnaJ. | ATP-dependent hsl protease ATP-binding subunit HslU (heat shock protein HslU); ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.666 |
| dnaJ | hslV | AWOD_I_1103 | AWOD_I_0323 | Chaperone protein DnaJ. | ATP-dependent protease HslV (heat shock protein HslV); Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.490 |
| dnaJ | lon | AWOD_I_1103 | AWOD_I_0765 | Chaperone protein DnaJ. | ATP-dependent protease LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.669 |
| dnaJ | vasG | AWOD_I_1103 | AWOD_II_0120 | Chaperone protein DnaJ. | Type VI secretion ATPase, ClpB protein; Belongs to the ClpA/ClpB family. | 0.704 |
| dnaJ | vasG-2 | AWOD_I_1103 | AWOD_I_0989 | Chaperone protein DnaJ. | Chaperone ClpB; Belongs to the ClpA/ClpB family. | 0.704 |
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