STRINGSTRING
chiA chiA CED71205.1 CED71205.1 CED71069.1 CED71069.1 exoI exoI CED70428.1 CED70428.1 pulA pulA CED70136.1 CED70136.1 CED70127.1 CED70127.1 malS malS amyS amyS chb chb malQ malQ glgB glgB CED57522.1 CED57522.1 CED57440.1 CED57440.1 treA treA nagZ nagZ ebgA ebgA CED56964.1 CED56964.1 nplT nplT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
chiAChitinase. (845 aa)
CED71205.1Alpha-amylase. (459 aa)
CED71069.1Chitodextrinase. (1055 aa)
exoIBeta-hexosaminidase (beta-N-acetylglucosaminidase). (634 aa)
CED70428.1Alpha amylase. (673 aa)
pulAPullulanase; Belongs to the glycosyl hydrolase 13 family. (1198 aa)
CED70136.1Putative beta-N-acetylhexosaminidase. (815 aa)
CED70127.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (462 aa)
malSAlpha-amylase. (554 aa)
amySAlpha-amylase. (505 aa)
chbN,N'-diacetylchitobiase (chitobiase). (881 aa)
malQ4-alpha-glucanotransferase. (726 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (715 aa)
CED57522.1Putative alpha amylase; Similar to Sulfolobus acidocaldarius Glycogen debranching enzyme (Amylase) TreX UniProt:O05152 (713 aa) fasta scores: E()=3.7e-85, 38.576% id in 674 aa; Belongs to the glycosyl hydrolase 13 family. (651 aa)
CED57440.1Glycosyl hydrolase. (543 aa)
treATrehalose-6-phosphate hydrolase. (556 aa)
nagZBeta-hexosaminidase (beta-N-acetylhexosaminidase); Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (331 aa)
ebgABeta-galactosidase, subunit alpha. (1033 aa)
CED56964.1Alpha-galactosidase. (578 aa)
nplTNeopullulanase; Belongs to the glycosyl hydrolase 13 family. (611 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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