STRINGSTRING
CED56936.1 CED56936.1 CED70644.1 CED70644.1 epsH epsH pilA pilA CED70276.1 CED70276.1 CED70274.1 CED70274.1 CED70271.1 CED70271.1 CED71386.1 CED71386.1 mshO-2 mshO-2 epsG epsG mshD-2 mshD-2 mshC-2 mshC-2 CED71825.1 CED71825.1 CED70648.1 CED70648.1 epsI epsI mshO-3 mshO-3 mshC mshC mshO mshO CED56686.1 CED56686.1 CED70645.1 CED70645.1 mshC-3 mshC-3 mshA mshA mshB mshB epsJ epsJ
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CED56936.1V10 pilin. (173 aa)
CED70644.1Membrane protein. (157 aa)
epsHGeneral secretion pathway protein H precursor. (197 aa)
pilAType IV pilin PilA; Belongs to the N-Me-Phe pilin family. (141 aa)
CED70276.1Putative uncharacterized general secretion pathway protein. (237 aa)
CED70274.1General secretion pathway protein. (151 aa)
CED70271.1General secretion pathway protein G. (132 aa)
CED71386.1Putative uncharacterized protein. (163 aa)
mshO-2MSHA biogenesis protein MshO. (262 aa)
epsGGeneral secretion pathway protein G. (150 aa)
mshD-2MSHA pilin protein MshD. (188 aa)
mshC-2MSHA pilin protein MshC. (164 aa)
CED71825.1Membrane protein, putative pilin. (182 aa)
CED70648.1Putative type IV pilin. (141 aa)
epsIGeneral secretion pathway protein I. (126 aa)
mshO-3Putative exported protein MshO. (241 aa)
mshCMSHA pilin protein MshC. (175 aa)
mshOMSHA biogenesis protein MshO. (267 aa)
CED56686.1Putative secretion protein. (170 aa)
CED70645.1Putative type IV pilin. (166 aa)
mshC-3Type IV pilus, MSHA pilin protein MshC. (196 aa)
mshAType IV pilus, MSHA pilin protein MshA. (153 aa)
mshBType IV pilus, MSHA pilin protein MshB. (187 aa)
epsJGeneral secretion pathway protein J. (225 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.