STRINGSTRING
nplT nplT treB treB treA treA CED57440.1 CED57440.1 CED57522.1 CED57522.1 glgA glgA glgC glgC glgB glgB malQ malQ malP malP scrK scrK CED57707.1 CED57707.1 CED57708.1 CED57708.1 amyS amyS malS malS CED70127.1 CED70127.1 pulA pulA pgm pgm CED71205.1 CED71205.1 crr crr galU galU pgi pgi
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nplTNeopullulanase; Belongs to the glycosyl hydrolase 13 family. (611 aa)
treBPTS system, trehalose-specific EIIBC component. (474 aa)
treATrehalose-6-phosphate hydrolase. (556 aa)
CED57440.1Glycosyl hydrolase. (543 aa)
CED57522.1Putative alpha amylase; Similar to Sulfolobus acidocaldarius Glycogen debranching enzyme (Amylase) TreX UniProt:O05152 (713 aa) fasta scores: E()=3.7e-85, 38.576% id in 674 aa; Belongs to the glycosyl hydrolase 13 family. (651 aa)
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (482 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (405 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (715 aa)
malQ4-alpha-glucanotransferase. (726 aa)
malPPhosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (817 aa)
scrKFructokinase. (308 aa)
CED57707.1PTS system, sucrose-specific EIIBC component. (457 aa)
CED57708.1Glycosyl hydrolase, Family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (486 aa)
amySAlpha-amylase. (505 aa)
malSAlpha-amylase. (554 aa)
CED70127.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (462 aa)
pulAPullulanase; Belongs to the glycosyl hydrolase 13 family. (1198 aa)
pgmPhosphoglucomutase. (548 aa)
CED71205.1Alpha-amylase. (459 aa)
crrGlucose-specific phosphotransferase enzyme IIA component (PTS system). (169 aa)
galUUTP-glucose-1-phosphate uridylyltransferase. (289 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (550 aa)
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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