STRINGSTRING
traf6 traf6 ikbkg ikbkg LOC101162959 LOC101162959 irak4 irak4 nod1 nod1 LOC101174929 LOC101174929 tlr3 tlr3 ripk2 ripk2 myd88 myd88 tab1 tab1 LOC101163128 LOC101163128 CHUK CHUK tirap tirap LOC101155381 LOC101155381 traf3 traf3 tab3 tab3 map3k7 map3k7 tab2 tab2 LOC101154981 LOC101154981 LOC101158892 LOC101158892 nod2 nod2 LOC101166698 LOC101166698 tbk1 tbk1 LOC105356874 LOC105356874
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
traf6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (569 aa)
ikbkgInhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (585 aa)
LOC101162959TIR domain-containing protein. (831 aa)
irak4Interleukin-1 receptor-associated kinase 4. (457 aa)
nod1Nucleotide-binding oligomerization domain containing 1. (938 aa)
LOC101174929Toll-like receptor 1; Belongs to the Toll-like receptor family. (795 aa)
tlr3Toll-like receptor 3. (917 aa)
ripk2Receptor-interacting serine-threonine kinase 2. (590 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (288 aa)
tab1TGF-beta activated kinase 1/MAP3K7 binding protein 1. (504 aa)
LOC101163128TIR domain-containing protein; Belongs to the Toll-like receptor family. (826 aa)
CHUKComponent of inhibitor of nuclear factor kappa B kinase complex. (765 aa)
tirapToll-interleukin 1 receptor (TIR) domain containing adaptor protein. (252 aa)
LOC101155381Toll-like receptor 18. (873 aa)
traf3TNF receptor-associated factor. (450 aa)
tab3TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (610 aa)
map3k7Mitogen-activated protein kinase kinase kinase 7. (595 aa)
tab2TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (733 aa)
LOC101154981Toll-like receptor adaptor molecule 1. (577 aa)
LOC101158892Interferon regulatory factor 3. (463 aa)
nod2Nucleotide-binding oligomerization domain containing 2. (978 aa)
LOC101166698Protein kinase domain-containing protein. (721 aa)
tbk1TANK-binding kinase 1. (665 aa)
LOC105356874Protein kinase domain-containing protein. (501 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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