(10 nodes) ESCRT I complex network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vps28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (184 aa)
	LOC101173957	Multivesicular body subunit 12Ba. (294 aa)
	LOC101164318	Multivesicular body subunit 12Bb. (245 aa)
	mvb12a	Uncharacterized protein. (284 aa)
	vps37a	VPS37A subunit of ESCRT-I. (395 aa)
	vps37b	Zgc:114173. (280 aa)
	LOC101171305	VPS37C subunit of ESCRT-I. (373 aa)
	LOC101166028	Zgc:123278. (182 aa)
	ENSORLP00000040649	VPS37 C-terminal domain-containing protein. (134 aa)
	tsg101	Tumor susceptibility 101a. (384 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000040649	LOC101164318	ENSORLP00000040649	ENSORLP00000016634	VPS37 C-terminal domain-containing protein.	Multivesicular body subunit 12Bb.	0.913
ENSORLP00000040649	LOC101166028	ENSORLP00000040649	ENSORLP00000029199	VPS37 C-terminal domain-containing protein.	Zgc:123278.	0.918
ENSORLP00000040649	LOC101171305	ENSORLP00000040649	ENSORLP00000028007	VPS37 C-terminal domain-containing protein.	VPS37C subunit of ESCRT-I.	0.540
ENSORLP00000040649	LOC101173957	ENSORLP00000040649	ENSORLP00000016554	VPS37 C-terminal domain-containing protein.	Multivesicular body subunit 12Ba.	0.913
ENSORLP00000040649	mvb12a	ENSORLP00000040649	ENSORLP00000018841	VPS37 C-terminal domain-containing protein.	Uncharacterized protein.	0.936
ENSORLP00000040649	tsg101	ENSORLP00000040649	ENSORLP00000045855	VPS37 C-terminal domain-containing protein.	Tumor susceptibility 101a.	0.918
ENSORLP00000040649	vps28	ENSORLP00000040649	ENSORLP00000015800	VPS37 C-terminal domain-containing protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.958
ENSORLP00000040649	vps37a	ENSORLP00000040649	ENSORLP00000024533	VPS37 C-terminal domain-containing protein.	VPS37A subunit of ESCRT-I.	0.763
ENSORLP00000040649	vps37b	ENSORLP00000040649	ENSORLP00000026409	VPS37 C-terminal domain-containing protein.	Zgc:114173.	0.762
LOC101164318	ENSORLP00000040649	ENSORLP00000016634	ENSORLP00000040649	Multivesicular body subunit 12Bb.	VPS37 C-terminal domain-containing protein.	0.913
LOC101164318	LOC101166028	ENSORLP00000016634	ENSORLP00000029199	Multivesicular body subunit 12Bb.	Zgc:123278.	0.954
LOC101164318	LOC101171305	ENSORLP00000016634	ENSORLP00000028007	Multivesicular body subunit 12Bb.	VPS37C subunit of ESCRT-I.	0.913
LOC101164318	LOC101173957	ENSORLP00000016634	ENSORLP00000016554	Multivesicular body subunit 12Bb.	Multivesicular body subunit 12Ba.	0.903
LOC101164318	mvb12a	ENSORLP00000016634	ENSORLP00000018841	Multivesicular body subunit 12Bb.	Uncharacterized protein.	0.951
LOC101164318	tsg101	ENSORLP00000016634	ENSORLP00000045855	Multivesicular body subunit 12Bb.	Tumor susceptibility 101a.	0.954
LOC101164318	vps28	ENSORLP00000016634	ENSORLP00000015800	Multivesicular body subunit 12Bb.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.982
LOC101164318	vps37a	ENSORLP00000016634	ENSORLP00000024533	Multivesicular body subunit 12Bb.	VPS37A subunit of ESCRT-I.	0.956
LOC101164318	vps37b	ENSORLP00000016634	ENSORLP00000026409	Multivesicular body subunit 12Bb.	Zgc:114173.	0.984
LOC101166028	ENSORLP00000040649	ENSORLP00000029199	ENSORLP00000040649	Zgc:123278.	VPS37 C-terminal domain-containing protein.	0.918
LOC101166028	LOC101164318	ENSORLP00000029199	ENSORLP00000016634	Zgc:123278.	Multivesicular body subunit 12Bb.	0.954