5 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101167527	Ribonuclease P 21 subunit. (146 aa)
	pop5	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (166 aa)
	pop4	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (221 aa)
	rpp30	Ribonuclease P/MRP 30 subunit. (289 aa)
	pop1	POP1 homolog, ribonuclease P/MRP subunit. (953 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101167527	pop1	ENSORLP00000001942	ENSORLP00000036393	Ribonuclease P 21 subunit.	POP1 homolog, ribonuclease P/MRP subunit.	0.999
LOC101167527	pop4	ENSORLP00000001942	ENSORLP00000025189	Ribonuclease P 21 subunit.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
LOC101167527	pop5	ENSORLP00000001942	ENSORLP00000018478	Ribonuclease P 21 subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
LOC101167527	rpp30	ENSORLP00000001942	ENSORLP00000025307	Ribonuclease P 21 subunit.	Ribonuclease P/MRP 30 subunit.	0.998
pop1	LOC101167527	ENSORLP00000036393	ENSORLP00000001942	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P 21 subunit.	0.999
pop1	pop4	ENSORLP00000036393	ENSORLP00000025189	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
pop1	pop5	ENSORLP00000036393	ENSORLP00000018478	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
pop1	rpp30	ENSORLP00000036393	ENSORLP00000025307	POP1 homolog, ribonuclease P/MRP subunit.	Ribonuclease P/MRP 30 subunit.	0.998
pop4	LOC101167527	ENSORLP00000025189	ENSORLP00000001942	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P 21 subunit.	0.999
pop4	pop1	ENSORLP00000025189	ENSORLP00000036393	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	POP1 homolog, ribonuclease P/MRP subunit.	0.999
pop4	pop5	ENSORLP00000025189	ENSORLP00000018478	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
pop4	rpp30	ENSORLP00000025189	ENSORLP00000025307	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P/MRP 30 subunit.	0.998
pop5	LOC101167527	ENSORLP00000018478	ENSORLP00000001942	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P 21 subunit.	0.999
pop5	pop1	ENSORLP00000018478	ENSORLP00000036393	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	POP1 homolog, ribonuclease P/MRP subunit.	0.999
pop5	pop4	ENSORLP00000018478	ENSORLP00000025189	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.999
pop5	rpp30	ENSORLP00000018478	ENSORLP00000025307	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	Ribonuclease P/MRP 30 subunit.	0.998
rpp30	LOC101167527	ENSORLP00000025307	ENSORLP00000001942	Ribonuclease P/MRP 30 subunit.	Ribonuclease P 21 subunit.	0.998
rpp30	pop1	ENSORLP00000025307	ENSORLP00000036393	Ribonuclease P/MRP 30 subunit.	POP1 homolog, ribonuclease P/MRP subunit.	0.998
rpp30	pop4	ENSORLP00000025307	ENSORLP00000025189	Ribonuclease P/MRP 30 subunit.	Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.998
rpp30	pop5	ENSORLP00000025307	ENSORLP00000018478	Ribonuclease P/MRP 30 subunit.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.	0.998