STRINGSTRING
notch1 notch1 LOC101160197 LOC101160197 rbpj rbpj Maml3 Maml3 rbpjl rbpjl maml2 maml2 maml1 maml1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
notch1Notch receptor 1b. (2507 aa)
LOC101160197E1A binding protein p300 a. (2781 aa)
rbpjRecombination signal binding protein for immunoglobulin kappa J region. (487 aa)
Maml3Uncharacterized protein. (321 aa)
rbpjlRecombination signal binding protein for immunoglobulin kappa J region-like. (528 aa)
maml2MamL-1 domain-containing protein. (889 aa)
maml1Mastermind-like transcriptional coactivator 1. (989 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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