STRINGSTRING
pef1 pef1 hebp3 hebp3 TINAGL1 TINAGL1 pdcd6 pdcd6 LOC101163059 LOC101163059 LOC101163130 LOC101163130 LOC101154833 LOC101154833 fam83b fam83b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pef1Penta-EF-hand domain containing 1. (263 aa)
hebp3Heme-binding protein 3. (213 aa)
TINAGL1Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. (474 aa)
pdcd6Programmed cell death 6. (185 aa)
LOC101163059Uncharacterized protein. (192 aa)
LOC101163130Heme binding protein 2. (192 aa)
LOC101154833Uncharacterized protein. (192 aa)
fam83bFamily with sequence similarity 83 member B. (904 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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