(35 nodes) Mixed, incl. SERTA motif, and Cytochrome b5-like heme/steroid binding domain network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	jade2	Jade family PHD finger 2. (912 aa)
	paqr5	Progestin and adipoQ receptor family member Va. (349 aa)
	LOC101169103	Hyaluronidase. (445 aa)
	gper1	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (354 aa)
	olfm3	Olfactomedin 3a. (457 aa)
	gpr12	G protein-coupled receptor 12; Belongs to the G-protein coupled receptor 1 family. (342 aa)
	txndc11	Thioredoxin domain containing 11. (845 aa)
	cemip2	Cell migration inducing hyaluronidase 2. (1386 aa)
	mog-12	Homeobox domain-containing protein. (301 aa)
	itgbl1	Integrin, beta-like 1. (486 aa)
	olgpcpr-gamma	Uncharacterized protein. (352 aa)
	pgrmc1	Progestin receptor membrane component 1; Belongs to the cytochrome b5 family. (181 aa)
	sh3rf3	SH3 domain containing ring finger 3. (845 aa)
	cdca4	Cell division cycle associated 4. (347 aa)
	LOC101164766	La ribonucleoprotein domain family, member 1B. (1072 aa)
	pgrmc2	Progestin receptor membrane component 2; Belongs to the cytochrome b5 family. (198 aa)
	jade1	Jade family PHD finger 1. (886 aa)
	ATAD3A	ATPase family AAA domain containing 3A. (668 aa)
	tspo	Translocator protein. (161 aa)
	LOC101168099	Dehydrogenase/reductase (SDR family) X-linked; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (361 aa)
	SERTAD2	SERTA domain containing 2b. (416 aa)
	ENSORLP00000028045	Si:dkey-177p2.6. (252 aa)
	pacc1	Proton activated chloride channel 1. (387 aa)
	camkk1	Calcium/calmodulin-dependent protein kinase kinase 1, alpha a. (508 aa)
	LOC100415783	Progestin and adipoQ receptor family member VII, b. (352 aa)
	LOC101165261	Procollagen C-endopeptidase enhancer b. (613 aa)
	letm1	Leucine zipper-EF-hand containing transmembrane protein 1. (780 aa)
	jade3	Jade family PHD finger 3. (779 aa)
	nenf	Neudesin neurotrophic factor; Belongs to the cytochrome b5 family. (159 aa)
	LOC101172535	Alanyl-tRNA synthetase domain containing 1. (412 aa)
	blvrb	SERTA domain-containing protein. (316 aa)
	clec11a	C-type lectin domain containing 11A. (271 aa)
	FGF14	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (270 aa)
	LOC105357543	SERTA domain containing 4. (367 aa)
	sfmbt2	Scm like with four mbt domains 2. (851 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATAD3A	gper1	ENSORLP00000022912	ENSORLP00000006336	ATPase family AAA domain containing 3A.	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family.	0.415
ATAD3A	pgrmc1	ENSORLP00000022912	ENSORLP00000017563	ATPase family AAA domain containing 3A.	Progestin receptor membrane component 1; Belongs to the cytochrome b5 family.	0.658
ATAD3A	pgrmc2	ENSORLP00000022912	ENSORLP00000022479	ATPase family AAA domain containing 3A.	Progestin receptor membrane component 2; Belongs to the cytochrome b5 family.	0.598
ATAD3A	tspo	ENSORLP00000022912	ENSORLP00000024729	ATPase family AAA domain containing 3A.	Translocator protein.	0.811
ENSORLP00000028045	LOC105357543	ENSORLP00000028045	ENSORLP00000044655	Si:dkey-177p2.6.	SERTA domain containing 4.	0.474
ENSORLP00000028045	cdca4	ENSORLP00000028045	ENSORLP00000022453	Si:dkey-177p2.6.	Cell division cycle associated 4.	0.631
FGF14	LOC101164766	ENSORLP00000043634	ENSORLP00000022474	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	La ribonucleoprotein domain family, member 1B.	0.422
FGF14	cdca4	ENSORLP00000043634	ENSORLP00000022453	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Cell division cycle associated 4.	0.439
FGF14	cemip2	ENSORLP00000043634	ENSORLP00000013537	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Cell migration inducing hyaluronidase 2.	0.436
FGF14	itgbl1	ENSORLP00000043634	ENSORLP00000013779	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Integrin, beta-like 1.	0.415
FGF14	letm1	ENSORLP00000043634	ENSORLP00000035680	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Leucine zipper-EF-hand containing transmembrane protein 1.	0.439
FGF14	mog-12	ENSORLP00000043634	ENSORLP00000013627	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Homeobox domain-containing protein.	0.433
FGF14	olfm3	ENSORLP00000043634	ENSORLP00000007069	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Olfactomedin 3a.	0.511
FGF14	sh3rf3	ENSORLP00000043634	ENSORLP00000019915	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	SH3 domain containing ring finger 3.	0.452
LOC100415783	gpr12	ENSORLP00000034943	ENSORLP00000011079	Progestin and adipoQ receptor family member VII, b.	G protein-coupled receptor 12; Belongs to the G-protein coupled receptor 1 family.	0.690
LOC100415783	pgrmc1	ENSORLP00000034943	ENSORLP00000017563	Progestin and adipoQ receptor family member VII, b.	Progestin receptor membrane component 1; Belongs to the cytochrome b5 family.	0.810
LOC100415783	pgrmc2	ENSORLP00000034943	ENSORLP00000022479	Progestin and adipoQ receptor family member VII, b.	Progestin receptor membrane component 2; Belongs to the cytochrome b5 family.	0.689
LOC101164766	FGF14	ENSORLP00000022474	ENSORLP00000043634	La ribonucleoprotein domain family, member 1B.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.422
LOC101164766	LOC101168099	ENSORLP00000022474	ENSORLP00000025570	La ribonucleoprotein domain family, member 1B.	Dehydrogenase/reductase (SDR family) X-linked; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.463
LOC101164766	camkk1	ENSORLP00000022474	ENSORLP00000029959	La ribonucleoprotein domain family, member 1B.	Calcium/calmodulin-dependent protein kinase kinase 1, alpha a.	0.619