STRINGSTRING
hoxb1 hoxb1 LOC101170520 LOC101170520 pknox1 pknox1 LOC101159440 LOC101159440 LOC101172525 LOC101172525 pknox2 pknox2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hoxb1Homeobox B1b. (278 aa)
LOC101170520Homeobox B1a. (394 aa)
pknox1Pbx/knotted 1 homeobox 1.1. (439 aa)
LOC101159440Pre-B-cell leukemia transcription factor 4. (381 aa)
LOC101172525Pre-B-cell leukemia homeobox 2. (396 aa)
pknox2Pbx/knotted 1 homeobox 2. (488 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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