(46 nodes) Mixed, incl. VWF/SSPO/Zonadhesin-like, cysteine-rich domain, and Transport of virus network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2L393_ORYLA	Ig-like domain-containing protein. (298 aa)
	H2L4P7_ORYLA	Uncharacterized protein. (796 aa)
	LOC101165639	Family with sequence similarity 83 member Fa. (532 aa)
	LOC101162908	NCK associated protein 5. (1922 aa)
	LOC101156610	Uncharacterized protein. (791 aa)
	LOC101156852	Uncharacterized protein. (586 aa)
	H2LGU8_ORYLA	CCHC-type domain-containing protein. (833 aa)
	LOC101160595	Si:dkey-219e21.2. (476 aa)
	LOC101165148	Tripartite motif containing 35-13. (471 aa)
	LOC101157880	Si:ch211-198a12.6. (554 aa)
	LOC100049333	Zona pellucida glycoprotein 3f, tandem duplicate 1. (313 aa)
	LOC110017553	G_PROTEIN_RECEP_F1_2 domain-containing protein. (381 aa)
	LOC101171232	Uncharacterized protein. (1296 aa)
	LOC105357844	ZP domain-containing protein. (584 aa)
	LOC105355972	Uncharacterized protein. (481 aa)
	LOC105357720	Uncharacterized protein. (1785 aa)
	ENSORLP00000027644	Uncharacterized protein. (381 aa)
	LOC101161642	BZIP domain-containing protein. (598 aa)
	LOC105356000	Si:dkeyp-97a10.3. (996 aa)
	LOC101171344	Raftlin, lipid raft linker 1a. (669 aa)
	ENSORLP00000029273	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (368 aa)
	LOC105356345	Uncharacterized protein. (785 aa)
	ENSORLP00000031112	N(alpha)-acetyltransferase 80, NatH catalytic subunit. (232 aa)
	LOC101155195	Uncharacterized protein. (880 aa)
	LOC101167096	DUF4596 domain-containing protein. (1337 aa)
	ENSORLP00000032906	Uncharacterized protein. (463 aa)
	gprin1	GRIN_C domain-containing protein. (676 aa)
	kiz	Kizuna centrosomal protein. (724 aa)
	ENSORLP00000034325	Glucocorticoid induced 1a. (218 aa)
	LOC101156967	Uncharacterized protein. (444 aa)
	LOC101157306	DUF4592 domain-containing protein. (1259 aa)
	LOC105356987	F-box domain-containing protein. (457 aa)
	LOC105356031	C-type lectin domain-containing protein. (251 aa)
	ENSORLP00000036529	Uncharacterized protein. (360 aa)
	LOC101169927	Uncharacterized protein. (434 aa)
	LOC101160625	Uncharacterized protein. (1145 aa)
	LOC101155176	Uncharacterized protein. (815 aa)
	ENSORLP00000039027	B box-type domain-containing protein. (208 aa)
	ENSORLP00000040846	Uncharacterized protein. (390 aa)
	LOC101172681	Zgc:174935. (222 aa)
	ENSORLP00000043490	Uncharacterized protein. (718 aa)
	luzp1	Leucine zipper protein 1. (1136 aa)
	LOC101164538	RRM domain-containing protein. (1178 aa)
	ENSORLP00000044779	Uncharacterized protein. (511 aa)
	LOC101171720	Uncharacterized protein. (753 aa)
	LOC101160091	Family with sequence similarity 53 member C. (446 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000029273	LOC101160625	ENSORLP00000029273	ENSORLP00000038493	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.427
ENSORLP00000031112	LOC101161642	ENSORLP00000031112	ENSORLP00000028523	N(alpha)-acetyltransferase 80, NatH catalytic subunit.	BZIP domain-containing protein.	0.558
ENSORLP00000043490	LOC101160625	ENSORLP00000043490	ENSORLP00000038493	Uncharacterized protein.	Uncharacterized protein.	0.408
ENSORLP00000043490	LOC110017553	ENSORLP00000043490	ENSORLP00000022781	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.432
H2LGU8_ORYLA	LOC101171232	ENSORLP00000005199	ENSORLP00000022958	CCHC-type domain-containing protein.	Uncharacterized protein.	0.493
LOC101155176	LOC110017553	ENSORLP00000038951	ENSORLP00000022781	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.435
LOC101155176	kiz	ENSORLP00000038951	ENSORLP00000033889	Uncharacterized protein.	Kizuna centrosomal protein.	0.440
LOC101156610	LOC110017553	ENSORLP00000003944	ENSORLP00000022781	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.430
LOC101156610	kiz	ENSORLP00000003944	ENSORLP00000033889	Uncharacterized protein.	Kizuna centrosomal protein.	0.408
LOC101156852	LOC110017553	ENSORLP00000005042	ENSORLP00000022781	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.417
LOC101156967	luzp1	ENSORLP00000035592	ENSORLP00000044222	Uncharacterized protein.	Leucine zipper protein 1.	0.403
LOC101160625	ENSORLP00000029273	ENSORLP00000038493	ENSORLP00000029273	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.427
LOC101160625	ENSORLP00000043490	ENSORLP00000038493	ENSORLP00000043490	Uncharacterized protein.	Uncharacterized protein.	0.408
LOC101160625	LOC105357844	ENSORLP00000038493	ENSORLP00000023556	Uncharacterized protein.	ZP domain-containing protein.	0.413
LOC101161642	ENSORLP00000031112	ENSORLP00000028523	ENSORLP00000031112	BZIP domain-containing protein.	N(alpha)-acetyltransferase 80, NatH catalytic subunit.	0.558
LOC101164538	LOC105356987	ENSORLP00000044555	ENSORLP00000035786	RRM domain-containing protein.	F-box domain-containing protein.	0.451
LOC101169927	LOC110017553	ENSORLP00000038249	ENSORLP00000022781	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.414
LOC101169927	kiz	ENSORLP00000038249	ENSORLP00000033889	Uncharacterized protein.	Kizuna centrosomal protein.	0.438
LOC101171232	H2LGU8_ORYLA	ENSORLP00000022958	ENSORLP00000005199	Uncharacterized protein.	CCHC-type domain-containing protein.	0.493
LOC101171720	LOC110017553	ENSORLP00000045440	ENSORLP00000022781	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.435