STRINGSTRING
LOC101174288 LOC101174288 LOC101173369 LOC101173369 LOC101154816 LOC101154816 LOC101169589 LOC101169589 cdh13 cdh13 CDH18 CDH18 LOC101161503 LOC101161503
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101174288Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins. (781 aa)
LOC101173369Junction plakoglobin a. (733 aa)
LOC101154816Cadherin 12, type 2a (N-cadherin 2); Cadherins are calcium-dependent cell adhesion proteins. (803 aa)
LOC101169589Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (840 aa)
cdh13Cadherin 13, H-cadherin (heart). (715 aa)
CDH18Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins. (796 aa)
LOC101161503Uncharacterized protein. (1338 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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