39 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mfsd6	Major facilitator superfamily domain containing 6a. (731 aa)
	mfsd10	Major facilitator superfamily domain containing 10. (450 aa)
	slc35a3	Solute carrier family 35 member A3a. (284 aa)
	LOC101171668	Uncharacterized protein. (446 aa)
	LOC101159706	Anion exchange protein. (841 aa)
	mfsd12	Major facilitator superfamily domain containing 12a. (477 aa)
	B3GNT3	Hexosyltransferase. (373 aa)
	slc17a9	Solute carrier family 17 member 9b. (466 aa)
	LOC101174149	Major facilitator superfamily domain containing 2B. (603 aa)
	slc29a3	Solute carrier family 29 member 3. (470 aa)
	mfsd13a	Major facilitator superfamily domain containing 13A. (509 aa)
	SPNS2	Sphingolipid transporter 2. (503 aa)
	LOC101168888	Spinster homolog 3 (Drosophila). (519 aa)
	slc46a2	Solute carrier family 46 member 2. (446 aa)
	tmem182	Transmembrane protein 182a. (243 aa)
	SMAP1	Small ArfGAP 1. (454 aa)
	slc29a4	Solute carrier family 29 member 4. (603 aa)
	LOC101167709	Major facilitator superfamily domain containing 4Ab. (547 aa)
	slc37a2	Solute carrier family 37 member 2. (499 aa)
	LOC101172657	Zgc:171501. (577 aa)
	LOC101174349	Solute carrier family 17 member 9. (458 aa)
	LOC101155975	Major facilitator superfamily domain containing 2aa. (514 aa)
	LOC101159082	MFS domain-containing protein. (479 aa)
	LOC101171648	Nipsnap homolog 3A (C. elegans). (241 aa)
	LOC101161175	SV2 related protein b. (549 aa)
	mfsd14a	Hippocampus abundant transcript 1a. (491 aa)
	ENSORLP00000028431	Hexosyltransferase. (369 aa)
	LOC101169097	Small ArfGAP 1. (422 aa)
	svopl	SVOP-like. (515 aa)
	mfsd11	Major facilitator superfamily domain containing 11. (450 aa)
	LOC101163345	MFS domain-containing protein. (523 aa)
	mfsd9	Major facilitator superfamily domain containing 9. (471 aa)
	mfsd6l	Major facilitator superfamily domain containing 6-like. (587 aa)
	unc93a	Unc-93 homolog A. (465 aa)
	slc35a2	Solute carrier family 35 member 2. (375 aa)
	mfsd3	Major facilitator superfamily domain containing 3. (421 aa)
	LOC101168081	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (260 aa)
	inpp4a	Inositol polyphosphate-4-phosphatase type I Aa. (963 aa)
	ENSORLP00000045963	Uncharacterized protein. (72 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101159082	mfsd3	ENSORLP00000024583	ENSORLP00000037460	MFS domain-containing protein.	Major facilitator superfamily domain containing 3.	0.424
LOC101159082	mfsd9	ENSORLP00000024583	ENSORLP00000033456	MFS domain-containing protein.	Major facilitator superfamily domain containing 9.	0.480
LOC101159082	slc35a3	ENSORLP00000024583	ENSORLP00000005253	MFS domain-containing protein.	Solute carrier family 35 member A3a.	0.409
LOC101159706	LOC101168081	ENSORLP00000006917	ENSORLP00000040470	Anion exchange protein.	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	0.520
LOC101161175	mfsd10	ENSORLP00000026436	ENSORLP00000001966	SV2 related protein b.	Major facilitator superfamily domain containing 10.	0.407
LOC101161175	mfsd9	ENSORLP00000026436	ENSORLP00000033456	SV2 related protein b.	Major facilitator superfamily domain containing 9.	0.454
LOC101163345	mfsd3	ENSORLP00000033171	ENSORLP00000037460	MFS domain-containing protein.	Major facilitator superfamily domain containing 3.	0.424
LOC101163345	mfsd9	ENSORLP00000033171	ENSORLP00000033456	MFS domain-containing protein.	Major facilitator superfamily domain containing 9.	0.475
LOC101168081	LOC101159706	ENSORLP00000040470	ENSORLP00000006917	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	Anion exchange protein.	0.520
LOC101168081	inpp4a	ENSORLP00000040470	ENSORLP00000042672	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	Inositol polyphosphate-4-phosphatase type I Aa.	0.400
LOC101168081	mfsd9	ENSORLP00000040470	ENSORLP00000033456	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	Major facilitator superfamily domain containing 9.	0.436
LOC101168081	tmem182	ENSORLP00000040470	ENSORLP00000015563	Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.	Transmembrane protein 182a.	0.416
LOC101168888	LOC101174149	ENSORLP00000014476	ENSORLP00000012642	Spinster homolog 3 (Drosophila).	Major facilitator superfamily domain containing 2B.	0.443
LOC101168888	mfsd11	ENSORLP00000014476	ENSORLP00000032022	Spinster homolog 3 (Drosophila).	Major facilitator superfamily domain containing 11.	0.443
LOC101168888	mfsd13a	ENSORLP00000014476	ENSORLP00000014392	Spinster homolog 3 (Drosophila).	Major facilitator superfamily domain containing 13A.	0.482
LOC101168888	mfsd6l	ENSORLP00000014476	ENSORLP00000033849	Spinster homolog 3 (Drosophila).	Major facilitator superfamily domain containing 6-like.	0.426
LOC101168888	mfsd9	ENSORLP00000014476	ENSORLP00000033456	Spinster homolog 3 (Drosophila).	Major facilitator superfamily domain containing 9.	0.407
LOC101171648	slc46a2	ENSORLP00000025393	ENSORLP00000014558	Nipsnap homolog 3A (C. elegans).	Solute carrier family 46 member 2.	0.571
LOC101171668	mfsd10	ENSORLP00000006194	ENSORLP00000001966	Uncharacterized protein.	Major facilitator superfamily domain containing 10.	0.491
LOC101171668	mfsd12	ENSORLP00000006194	ENSORLP00000009908	Uncharacterized protein.	Major facilitator superfamily domain containing 12a.	0.483