STRINGSTRING
smc1b smc1b rad21 rad21 smc1a smc1a LOC100301585 LOC100301585 LOC101173147 LOC101173147 ENSORLP00000028463 ENSORLP00000028463 smc3 smc3 pds5a pds5a LOC101173396 LOC101173396 LOC101158626 LOC101158626
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smc1bStructural maintenance of chromosomes protein. (1246 aa)
rad21Uncharacterized protein. (636 aa)
smc1aStructural maintenance of chromosomes protein. (1231 aa)
LOC100301585Stromal antigen 2b. (1272 aa)
LOC101173147RAD21 cohesin complex component like 1. (539 aa)
ENSORLP00000028463Rad21_Rec8_N domain-containing protein. (359 aa)
smc3Structural maintenance of chromosomes protein. (1216 aa)
pds5aPDS5 cohesin associated factor A. (1285 aa)
LOC101173396SCD domain-containing protein. (1217 aa)
LOC101158626Stromal antigen 2a. (1238 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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