STRINGSTRING
H2L392_ORYLA H2L392_ORYLA H3-3B H3-3B H2L5L2_ORYLA H2L5L2_ORYLA LOC101166735 LOC101166735 H2L743_ORYLA H2L743_ORYLA H2L747_ORYLA H2L747_ORYLA H2LD49_ORYLA H2LD49_ORYLA LOC101161131 LOC101161131 HIST1H4J HIST1H4J LOC110014793 LOC110014793 LOC101155571 LOC101155571 ENSORLP00000031706 ENSORLP00000031706 LOC101175183 LOC101175183 ENSORLP00000035450 ENSORLP00000035450 setd2 setd2 ENSORLP00000038070 ENSORLP00000038070 LOC101160692 LOC101160692 LOC101155571-3 LOC101155571-3 ENSORLP00000043593 ENSORLP00000043593 LOC101155571-4 LOC101155571-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2L392_ORYLAHistone H2A; Belongs to the histone H2A family. (139 aa)
H3-3BHistone H3; Belongs to the histone H3 family. (140 aa)
H2L5L2_ORYLAHistone H3; Belongs to the histone H3 family. (125 aa)
LOC101166735H2A histone family, member Y2. (411 aa)
H2L743_ORYLAHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
H2L747_ORYLAHistone H2A; Belongs to the histone H2A family. (130 aa)
H2LD49_ORYLAHistone H3; Belongs to the histone H3 family. (134 aa)
LOC101161131Lysine (K)-specific demethylase 6A, like. (1465 aa)
HIST1H4JHistone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
LOC110014793Histone domain-containing protein. (149 aa)
LOC101155571Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSORLP00000031706Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
LOC101175183Histone H3.3. (136 aa)
ENSORLP00000035450Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
setd2SET domain containing 2, histone lysine methyltransferase. (2587 aa)
ENSORLP00000038070Zgc:171759; Belongs to the histone H2B family. (207 aa)
LOC101160692Lysine (K)-specific demethylase 6B, a. (2016 aa)
LOC101155571-3Histone H2B 1/2. (124 aa)
ENSORLP00000043593Histone H2A; Belongs to the histone H2A family. (138 aa)
LOC101155571-4Histone H2B 1/2. (124 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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