STRINGSTRING
ccdc47 ccdc47 tmem147 tmem147 LOC101170423 LOC101170423 ncln ncln LOC101163550 LOC101163550 tmco1 tmco1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccdc47Coiled-coil domain containing 47. (504 aa)
tmem147Transmembrane protein 147. (225 aa)
LOC101170423Zgc:109965. (527 aa)
nclnNicalin. (576 aa)
LOC101163550Nodal modulator. (1221 aa)
tmco1Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. (209 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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