(18 nodes) Establishment of planar polarity network (Oryzias latipes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	LOC101166800	Si:dkey-16p21.7. (854 aa)
	VANGL2	Vang-like protein. (525 aa)
	cthrc1	Collagen triple helix repeat containing 1b. (229 aa)
	LOC101159565	Protein kinase domain-containing protein. (872 aa)
	LOC101171914	Fleer. (653 aa)
	B9d2	B9 domain containing 2. (204 aa)
	exoc5	Exocyst complex component 5. (717 aa)
	LOC105357421	Protein kinase domain-containing protein. (734 aa)
	ASTN2	Astrotactin 2. (1365 aa)
	nphp1	Nephronophthisis 1. (532 aa)
	LOC101155550	Protein kinase domain-containing protein. (692 aa)
	invs	Inversin. (963 aa)
	lrrc1	Leucine rich repeat containing 1. (497 aa)
	H2MA54_ORYLA	Uncharacterized protein. (489 aa)
	LOC101169939	RPGRIP1 like. (1240 aa)
	ttc8	Tetratricopeptide repeat domain 8. (505 aa)
	intu	Inturned planar cell polarity protein. (959 aa)
	PTK7	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family. (1072 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B9d2	LOC101169939	ENSORLP00000036632	ENSORLP00000017653	B9 domain containing 2.	RPGRIP1 like.	0.554
B9d2	intu	ENSORLP00000036632	ENSORLP00000044191	B9 domain containing 2.	Inturned planar cell polarity protein.	0.496
B9d2	nphp1	ENSORLP00000036632	ENSORLP00000004751	B9 domain containing 2.	Nephronophthisis 1.	0.646
H2MA54_ORYLA	PTK7	ENSORLP00000015402	ENSORLP00000026392	Uncharacterized protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.435
H2MA54_ORYLA	VANGL2	ENSORLP00000015402	ENSORLP00000003569	Uncharacterized protein.	Vang-like protein.	0.596
LOC101169939	B9d2	ENSORLP00000017653	ENSORLP00000036632	RPGRIP1 like.	B9 domain containing 2.	0.554
LOC101169939	invs	ENSORLP00000017653	ENSORLP00000011032	RPGRIP1 like.	Inversin.	0.478
LOC101169939	nphp1	ENSORLP00000017653	ENSORLP00000004751	RPGRIP1 like.	Nephronophthisis 1.	0.920
LOC101171914	intu	ENSORLP00000038375	ENSORLP00000044191	Fleer.	Inturned planar cell polarity protein.	0.528
LOC101171914	invs	ENSORLP00000038375	ENSORLP00000011032	Fleer.	Inversin.	0.435
LOC101171914	ttc8	ENSORLP00000038375	ENSORLP00000020588	Fleer.	Tetratricopeptide repeat domain 8.	0.512
PTK7	H2MA54_ORYLA	ENSORLP00000026392	ENSORLP00000015402	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.435
PTK7	VANGL2	ENSORLP00000026392	ENSORLP00000003569	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	Vang-like protein.	0.539
PTK7	lrrc1	ENSORLP00000026392	ENSORLP00000012353	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	Leucine rich repeat containing 1.	0.435
VANGL2	H2MA54_ORYLA	ENSORLP00000003569	ENSORLP00000015402	Vang-like protein.	Uncharacterized protein.	0.596
VANGL2	PTK7	ENSORLP00000003569	ENSORLP00000026392	Vang-like protein.	Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.539
VANGL2	invs	ENSORLP00000003569	ENSORLP00000011032	Vang-like protein.	Inversin.	0.600
VANGL2	lrrc1	ENSORLP00000003569	ENSORLP00000012353	Vang-like protein.	Leucine rich repeat containing 1.	0.596
intu	B9d2	ENSORLP00000044191	ENSORLP00000036632	Inturned planar cell polarity protein.	B9 domain containing 2.	0.496
intu	LOC101171914	ENSORLP00000044191	ENSORLP00000038375	Inturned planar cell polarity protein.	Fleer.	0.528