46 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cbl	Cbl proto-oncogene, E3 ubiquitin protein ligase. (946 aa)
	rasa1	RAS p21 protein activator (GTPase activating protein) 1a. (1055 aa)
	crk	CRK proto-oncogene, adaptor protein. (315 aa)
	shc1	SHC (Src homology 2 domain containing) transforming protein 1. (449 aa)
	LOC101166194	GRB2 related adaptor protein b. (261 aa)
	LOC101166360	SH2 domain containing 3A. (833 aa)
	LOC101158476	Cbl proto-oncogene C, E3 ubiquitin protein ligase. (557 aa)
	bcar3	BCAR3 adaptor protein, NSP family member. (958 aa)
	ptpn6	Protein tyrosine phosphatase non-receptor type 6. (582 aa)
	LOC101160815	GRB2 related adaptor protein a. (217 aa)
	LOC101162409	Src homology 2 domain containing transforming protein D, a. (435 aa)
	SHC3	SHC adaptor protein 3. (665 aa)
	LOC101163907	Uncharacterized protein. (386 aa)
	pik3r1	Phosphoinositide-3-kinase, regulatory subunit 1 (alpha). (728 aa)
	LOC101165394	GRB2 related adaptor protein 2a. (283 aa)
	LOC101172160	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (306 aa)
	sh2d3c	SH2 domain containing 3Ca. (908 aa)
	LOC101155144	Uncharacterized protein. (466 aa)
	LOC101163758	Uncharacterized protein. (852 aa)
	grb2	Growth factor receptor-bound protein 2b. (218 aa)
	H2MSU3_ORYLA	Uncharacterized protein. (420 aa)
	ldlrap1	Low density lipoprotein receptor adaptor protein 1b. (320 aa)
	abl2	Tyrosine-protein kinase. (1185 aa)
	LOC101163728	Uncharacterized protein. (409 aa)
	SHC4	SHC adaptor protein 4. (534 aa)
	socs3	Suppressor of cytokine signaling 3a. (201 aa)
	cblb	Cbl proto-oncogene B, E3 ubiquitin protein ligase. (906 aa)
	she	Src homology 2 domain containing E. (469 aa)
	LOC101170171	Zeta chain of T cell receptor associated protein kinase 70. (668 aa)
	ENSORLP00000030231	SH2 domain-containing protein. (116 aa)
	ENSORLP00000031372	Tyrosine-protein phosphatase domain-containing protein. (113 aa)
	socs3-2	Uncharacterized protein. (229 aa)
	LOC101158013	Src homology 2 domain containing transforming protein D, b. (419 aa)
	abl1	Tyrosine-protein kinase. (1106 aa)
	LOC101174210	Protein kinase domain-containing protein. (425 aa)
	LOC101174278	Low density lipoprotein receptor adaptor protein 1a. (294 aa)
	SHF	Src homology 2 domain containing F. (472 aa)
	ptpn11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (596 aa)
	syk	Tyrosine-protein kinase. (624 aa)
	LOC101165133	Ras-GEF domain-containing protein. (366 aa)
	ENSORLP00000034279	Uncharacterized protein. (155 aa)
	pik3r3	Phosphoinositide-3-kinase, regulatory subunit 3b (gamma). (719 aa)
	LOC110016423	Uncharacterized protein. (313 aa)
	sh3bp2	SH3-domain binding protein 2. (609 aa)
	samsn1	Uncharacterized protein. (523 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2MSU3_ORYLA	LOC101155144	ENSORLP00000021836	ENSORLP00000013359	Uncharacterized protein.	Uncharacterized protein.	0.902
H2MSU3_ORYLA	LOC101158476	ENSORLP00000021836	ENSORLP00000044381	Uncharacterized protein.	Cbl proto-oncogene C, E3 ubiquitin protein ligase.	0.627
H2MSU3_ORYLA	LOC101160815	ENSORLP00000021836	ENSORLP00000015727	Uncharacterized protein.	GRB2 related adaptor protein a.	0.570
H2MSU3_ORYLA	LOC101163728	ENSORLP00000021836	ENSORLP00000026102	Uncharacterized protein.	Uncharacterized protein.	0.902
H2MSU3_ORYLA	LOC101163758	ENSORLP00000021836	ENSORLP00000018205	Uncharacterized protein.	Uncharacterized protein.	0.627
H2MSU3_ORYLA	LOC101165394	ENSORLP00000021836	ENSORLP00000001729	Uncharacterized protein.	GRB2 related adaptor protein 2a.	0.590
H2MSU3_ORYLA	LOC101166194	ENSORLP00000021836	ENSORLP00000011080	Uncharacterized protein.	GRB2 related adaptor protein b.	0.570
H2MSU3_ORYLA	LOC101170171	ENSORLP00000021836	ENSORLP00000028913	Uncharacterized protein.	Zeta chain of T cell receptor associated protein kinase 70.	0.439
H2MSU3_ORYLA	LOC101172160	ENSORLP00000021836	ENSORLP00000000761	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.538
H2MSU3_ORYLA	SHC3	ENSORLP00000021836	ENSORLP00000007238	Uncharacterized protein.	SHC adaptor protein 3.	0.567
H2MSU3_ORYLA	SHC4	ENSORLP00000021836	ENSORLP00000027207	Uncharacterized protein.	SHC adaptor protein 4.	0.567
H2MSU3_ORYLA	cbl	ENSORLP00000021836	ENSORLP00000009540	Uncharacterized protein.	Cbl proto-oncogene, E3 ubiquitin protein ligase.	0.627
H2MSU3_ORYLA	cblb	ENSORLP00000021836	ENSORLP00000027732	Uncharacterized protein.	Cbl proto-oncogene B, E3 ubiquitin protein ligase.	0.627
H2MSU3_ORYLA	grb2	ENSORLP00000021836	ENSORLP00000019097	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.826
H2MSU3_ORYLA	pik3r1	ENSORLP00000021836	ENSORLP00000003326	Uncharacterized protein.	Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).	0.900
H2MSU3_ORYLA	pik3r3	ENSORLP00000021836	ENSORLP00000034046	Uncharacterized protein.	Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).	0.901
H2MSU3_ORYLA	ptpn11	ENSORLP00000021836	ENSORLP00000039210	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.538
H2MSU3_ORYLA	ptpn6	ENSORLP00000021836	ENSORLP00000015555	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 6.	0.538
H2MSU3_ORYLA	shc1	ENSORLP00000021836	ENSORLP00000012223	Uncharacterized protein.	SHC (Src homology 2 domain containing) transforming protein 1.	0.567
H2MSU3_ORYLA	socs3	ENSORLP00000021836	ENSORLP00000027499	Uncharacterized protein.	Suppressor of cytokine signaling 3a.	0.569