41 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PGAM1	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (254 aa)
	LOC101164634	Hexokinase domain containing 1. (897 aa)
	LOC101156878	Hexokinase 1. (918 aa)
	LOC101160396	ADP-dependent glucokinase 2. (493 aa)
	ENO2	Enolase 2. (475 aa)
	LOC101165077	Enolase 2. (434 aa)
	LOC101174339	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (777 aa)
	pfkp	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (874 aa)
	LOC101159663	Enolase 1b, (alpha). (434 aa)
	eno1	Enolase 1a, (alpha). (432 aa)
	pfkl	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (780 aa)
	galk1	Galactokinase 1. (393 aa)
	OGDH	Oxoglutarate dehydrogenase. (1025 aa)
	H2MR50_ORYLA	Uncharacterized protein. (156 aa)
	adpgk	ADP-dependent glucokinase. (489 aa)
	gck	Phosphotransferase. (478 aa)
	bpgm	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (258 aa)
	dhtkd1	Dehydrogenase E1 and transketolase domain containing 1. (922 aa)
	LOC100049273	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (364 aa)
	LOC101155970	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (788 aa)
	gapdh	Glyceraldehyde-3-phosphate dehydrogenase. (333 aa)
	LOC101165960	Phosphotransferase. (492 aa)
	LOC101164987	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (255 aa)
	eno4	Enolase 4. (593 aa)
	LOC101167730	Glyceraldehyde-3-phosphate dehydrogenase. (335 aa)
	gpi	Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
	foxk1	Uncharacterized protein. (676 aa)
	LOC101163920	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (381 aa)
	HK1	Hexokinase 1. (919 aa)
	LOC101173933	Glucose-6-phosphate isomerase; Belongs to the GPI family. (553 aa)
	LOC101160321	Forkhead box K2. (606 aa)
	LOC101166309	Hexokinase 2. (916 aa)
	tpi1	Triosephosphate isomerase. (247 aa)
	LOC101160853	Uncharacterized protein. (591 aa)
	pgk1	Phosphoglycerate kinase. (421 aa)
	htr2a	5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a. (487 aa)
	aldoc	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (455 aa)
	aldoa	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (363 aa)
	LOC101160253	Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide). (1016 aa)
	LOC101165489	Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis. (248 aa)
	LOC101163079	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (780 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENO2	LOC100049273	ENSORLP00000042984	ENSORLP00000005965	Enolase 2.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.894
ENO2	LOC101155970	ENSORLP00000042984	ENSORLP00000006218	Enolase 2.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.653
ENO2	LOC101159663	ENSORLP00000042984	ENSORLP00000039620	Enolase 2.	Enolase 1b, (alpha).	0.583
ENO2	LOC101163079	ENSORLP00000042984	ENSORLP00000008462	Enolase 2.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.653
ENO2	LOC101163920	ENSORLP00000042984	ENSORLP00000026783	Enolase 2.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.894
ENO2	LOC101164987	ENSORLP00000042984	ENSORLP00000032041	Enolase 2.	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.972
ENO2	LOC101165077	ENSORLP00000042984	ENSORLP00000043606	Enolase 2.	Enolase 2.	0.544
ENO2	LOC101165489	ENSORLP00000042984	ENSORLP00000008028	Enolase 2.	Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis.	0.921
ENO2	LOC101165960	ENSORLP00000042984	ENSORLP00000033399	Enolase 2.	Phosphotransferase.	0.615
ENO2	LOC101166309	ENSORLP00000042984	ENSORLP00000019339	Enolase 2.	Hexokinase 2.	0.591
ENO2	LOC101167730	ENSORLP00000042984	ENSORLP00000028200	Enolase 2.	Glyceraldehyde-3-phosphate dehydrogenase.	0.804
ENO2	LOC101173933	ENSORLP00000042984	ENSORLP00000000310	Enolase 2.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.953
ENO2	LOC101174339	ENSORLP00000042984	ENSORLP00000044595	Enolase 2.	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.	0.653
ENO2	PGAM1	ENSORLP00000042984	ENSORLP00000009518	Enolase 2.	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.972
ENO2	aldoa	ENSORLP00000042984	ENSORLP00000008000	Enolase 2.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.894
ENO2	aldoc	ENSORLP00000042984	ENSORLP00000006739	Enolase 2.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.495
ENO2	bpgm	ENSORLP00000042984	ENSORLP00000004569	Enolase 2.	Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.	0.972
ENO2	eno1	ENSORLP00000042984	ENSORLP00000041904	Enolase 2.	Enolase 1a, (alpha).	0.589
ENO2	eno4	ENSORLP00000042984	ENSORLP00000029966	Enolase 2.	Enolase 4.	0.676
ENO2	gapdh	ENSORLP00000042984	ENSORLP00000038395	Enolase 2.	Glyceraldehyde-3-phosphate dehydrogenase.	0.804