STRINGSTRING
hdgfl2 hdgfl2 sgcb sgcb kmt5b kmt5b LOC101157279 LOC101157279 csrp3 csrp3 LOC101157631 LOC101157631 FHL1 FHL1 LOC101165461 LOC101165461 H2L8C2_ORYLA H2L8C2_ORYLA LOC101155872 LOC101155872 LOC101174116 LOC101174116 LOC101174677 LOC101174677 LOC101166743 LOC101166743 HOMER1 HOMER1 LOC101160197 LOC101160197 ripor3 ripor3 zfpm2 zfpm2 lrrc39 lrrc39 LOC101159505 LOC101159505 LOC101159866 LOC101159866 LOC111949086 LOC111949086 LOC101172654 LOC101172654 ankrd1 ankrd1 LOC101161247 LOC101161247 MYOZ1 MYOZ1 SMAD4 SMAD4 LOC101164848 LOC101164848 r3hdm2 r3hdm2 LOC101164972 LOC101164972 MBNL1 MBNL1 scx scx nphs1 nphs1 LOC101164517 LOC101164517 scube2 scube2 LOC101156569 LOC101156569 nkx2-5 nkx2-5 ednra ednra lamc1 lamc1 p2rx2 p2rx2 hoxc8 hoxc8 LOC101161576 LOC101161576 msc msc frg1 frg1 wnt2bb wnt2bb H2LWG8_ORYLA H2LWG8_ORYLA popdc2 popdc2 LOC101174306 LOC101174306 LOC101163175 LOC101163175 LOC100049217 LOC100049217 unc45b unc45b CERT1 CERT1 LOC101166589 LOC101166589 LOC101168740 LOC101168740 shh shh cemip2 cemip2 dag1 dag1 LOC101159335 LOC101159335 bin3 bin3 LOC101173073 LOC101173073 LOC101163271 LOC101163271 LOC101156509 LOC101156509 dner dner mpp5 mpp5 unc45a unc45a LOC101169506 LOC101169506 LOC101164434 LOC101164434 chst11 chst11 hlx hlx LOC101168893 LOC101168893 tmem182 tmem182 rbm24 rbm24 LOC101158568 LOC101158568 lbx1 lbx1 LOC101168402 LOC101168402 ripor2 ripor2 fermt2 fermt2 LMOD3 LMOD3 sirt1 sirt1 smo smo gtf3c5 gtf3c5 selenon selenon megf10 megf10 smyd2 smyd2 tcf15 tcf15 H2MJT0_ORYLA H2MJT0_ORYLA tbx1 tbx1 LOC101157720 LOC101157720 HAND1 HAND1 six1 six1 myog myog LOC101167500 LOC101167500 disp1 disp1 myf5 myf5 myf6 myf6 msx1 msx1 LOC101170315 LOC101170315 mymk mymk LOC101171790 LOC101171790 LOC101173990 LOC101173990 klhl41 klhl41 cdk5 cdk5 LOC101169259 LOC101169259 MEGF11 MEGF11 LOC101170393 LOC101170393 popdc3 popdc3 atf3 atf3 phox2b phox2b MPP5 MPP5 Nf1 Nf1 mkx mkx LOC101164252 LOC101164252 id3 id3 LOC101171744 LOC101171744 MBNL2 MBNL2 MEF2D MEF2D xbp1 xbp1 ptcd2 ptcd2 meox2 meox2 klf5 klf5 taz taz mstn mstn LOC101165521 LOC101165521 LOC101173916 LOC101173916 LOC101169146 LOC101169146 hlf hlf ENSORLP00000029960 ENSORLP00000029960 LOC101161235 LOC101161235 mylpf mylpf noc3l noc3l tcf21 tcf21 LOC101168331 LOC101168331 bves bves LOC101174373 LOC101174373 LOC101168870 LOC101168870 hsp90ab1 hsp90ab1 LOC105357454 LOC105357454 ky ky ENSORLP00000033705 ENSORLP00000033705 stac3 stac3 LOC101171215 LOC101171215 LOC101165037 LOC101165037 ENSORLP00000035594 ENSORLP00000035594 gpcpd1 gpcpd1 LOC101157753 LOC101157753 LOC101173138 LOC101173138 cd164 cd164 LOC101160830 LOC101160830 rb1 rb1 LOC101156720 LOC101156720 TCF24 TCF24 LOC101165732 LOC101165732 LOC101171576 LOC101171576 gdf5 gdf5 LOC101171064 LOC101171064 lamc3 lamc3 ENSORLP00000039489 ENSORLP00000039489 LOC101172899 LOC101172899 med1 med1 LOC101174831 LOC101174831 LOC101172686 LOC101172686 LOC101171509 LOC101171509 svil svil LOC101163504 LOC101163504 speg speg ENSORLP00000045591 ENSORLP00000045591 myod1 myod1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hdgfl2PWWP domain-containing protein. (612 aa)
sgcbSarcoglycan, beta (dystrophin-associated glycoprotein). (312 aa)
kmt5bLysine methyltransferase 5B. (864 aa)
LOC101157279Uncharacterized protein. (619 aa)
csrp3Cysteine and glycine-rich protein 3 (cardiac LIM protein). (193 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
FHL1Four and a half LIM domains 1. (297 aa)
LOC101165461Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2214 aa)
H2L8C2_ORYLAMyosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1125 aa)
LOC101155872Four and a half LIM domains 1b. (329 aa)
LOC101174116Ceramide transporter 1b. (690 aa)
LOC101174677Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate. (464 aa)
LOC101166743HP domain-containing protein. (1630 aa)
HOMER1Homer scaffold protein 1. (376 aa)
LOC101160197E1A binding protein p300 a. (2781 aa)
ripor3RIPOR family member 3. (787 aa)
zfpm2Zinc finger protein, FOG family member 2a. (1170 aa)
lrrc39Leucine rich repeat containing 39. (334 aa)
LOC101159505Titin-cap (telethonin). (179 aa)
LOC101159866Caveolae associated protein 4b. (301 aa)
LOC111949086BTB domain-containing protein. (644 aa)
LOC101172654Uncharacterized protein. (189 aa)
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (307 aa)
LOC101161247SET and MYND domain containing 1b. (489 aa)
MYOZ1Myozenin 1. (315 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
LOC101164848Supervillin d. (1481 aa)
r3hdm2R3H domain containing 2. (1069 aa)
LOC101164972Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (381 aa)
MBNL1Muscleblind like splicing regulator 1. (398 aa)
scxScleraxis bHLH transcription factor a. (214 aa)
nphs1NPHS1 adhesion molecule, nephrin. (1180 aa)
LOC101164517Ankyrin repeat domain 33ba. (535 aa)
scube2Signal peptide, CUB domain, EGF-like 2. (1020 aa)
LOC101156569Troponin I type 1b (skeletal, slow). (185 aa)
nkx2-5Homeobox domain-containing protein. (319 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (439 aa)
lamc1Uncharacterized protein. (1595 aa)
p2rx2P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (412 aa)
hoxc8Homeobox C10a. (376 aa)
LOC101161576RNA binding motif protein 24b. (237 aa)
mscMusculin (activated B-cell factor-1). (166 aa)
frg1FSHD region gene 1. (274 aa)
wnt2bbProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (391 aa)
H2LWG8_ORYLATroponin I type 1a (skeletal, slow). (165 aa)
popdc2Popeye domain containing 2. (379 aa)
LOC101174306Striated muscle enriched protein kinase b. (2693 aa)
LOC101163175Homer scaffold protein 1b. (359 aa)
LOC100049217Muscle segment homeobox 3. (250 aa)
unc45bUnc-45 myosin chaperone B. (931 aa)
CERT1Ceramide transporter 1. (618 aa)
LOC101166589Kelch-like family member 40b. (612 aa)
LOC101168740Mohawk homeobox b. (385 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (414 aa)
cemip2Cell migration inducing hyaluronidase 2. (1386 aa)
dag1Dystroglycan 1. (868 aa)
LOC101159335SET and MYND domain containing 2a. (435 aa)
bin3Bridging integrator 3. (251 aa)
LOC101173073Uncharacterized protein. (478 aa)
LOC101163271RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events. (387 aa)
LOC101156509Uncharacterized protein. (639 aa)
dnerDelta/notch-like EGF repeat containing. (757 aa)
mpp5Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (646 aa)
unc45aUnc-45 myosin chaperone A. (940 aa)
LOC101169506Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2. (730 aa)
LOC101164434Kelch-like family member 40a. (651 aa)
chst11Carbohydrate sulfotransferase. (379 aa)
hlxH2.0-like homeo box 1 (Drosophila). (387 aa)
LOC101168893Kell metallo-endopeptidase (Kell blood group). (799 aa)
tmem182Transmembrane protein 182a. (243 aa)
rbm24RNA binding motif protein 24a. (232 aa)
LOC101158568QKI, KH domain containing, RNA binding a. (343 aa)
lbx1Ladybird homeobox 1. (270 aa)
LOC101168402Ankyrin repeat domain 33Bb. (528 aa)
ripor2RHO family interacting cell polarization regulator 2. (1127 aa)
fermt2Fermitin family member 2. (695 aa)
LMOD3Leiomodin 3. (643 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (828 aa)
gtf3c5General transcription factor IIIC, polypeptide 5. (530 aa)
selenonSelenoprotein N. (555 aa)
megf10Multiple EGF-like-domains 10. (1122 aa)
smyd2SET and MYND domain containing 2b. (447 aa)
tcf15Transcription factor 15. (178 aa)
H2MJT0_ORYLAUncharacterized protein. (589 aa)
tbx1T-box transcription factor 1. (503 aa)
LOC101157720Kruppel-like factor 5 like. (424 aa)
HAND1Heart and neural crest derivatives expressed 1. (191 aa)
six1SIX homeobox 1a. (284 aa)
myogMyogenin. (248 aa)
LOC101167500Myosin, light chain 1, alkali; skeletal, fast. (194 aa)
disp1Dispatched homolog 1 (Drosophila). (1362 aa)
myf5Myogenic factor. (240 aa)
myf6Myogenic factor 6. (253 aa)
msx1Muscle segment homeobox 1a. (275 aa)
LOC101170315Requiem_N domain-containing protein. (419 aa)
mymkMyomaker, myoblast fusion factor. (240 aa)
LOC101171790Adenylosuccinate synthetase isozyme 1; Component of the purine nucleotide cycle (PNC), which interconverts IMP and AMP to regulate the nucleotide levels in various tissues, and which contributes to glycolysis and ammoniagenesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP. (457 aa)
LOC101173990Zinc finger and BTB domain containing 42. (401 aa)
klhl41Kelch-like family member 41a. (597 aa)
cdk5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
LOC101169259Ankyrin repeat and SOCS box containing 2a, tandem duplicate 1. (639 aa)
MEGF11Multiple EGF like domains 11. (911 aa)
LOC101170393Myozenin 2b. (215 aa)
popdc3Popeye domain containing 3. (303 aa)
atf3Activating transcription factor 3. (212 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
MPP5Membrane palmitoylated protein 5; Belongs to the MAGUK family. (667 aa)
Nf1Uncharacterized protein. (506 aa)
mkxMohawk homeobox a. (399 aa)
LOC101164252Caveolae associated protein 4a. (330 aa)
id3Inhibitor of DNA binding 3. (118 aa)
LOC101171744Ankyrin repeat domain 33Aa. (449 aa)
MBNL2Muscleblind like splicing regulator 2. (423 aa)
MEF2DMyocyte enhancer factor 2D. (562 aa)
xbp1X-box binding protein 1. (259 aa)
ptcd2Pentatricopeptide repeat domain 2. (390 aa)
meox2Mesenchyme homeobox 2a. (366 aa)
klf5Progesterone immunomodulatory binding factor 1. (498 aa)
tazTafazzin family protein; Belongs to the taffazin family. (262 aa)
mstnTGF_BETA_2 domain-containing protein. (424 aa)
LOC101165521Myozenin 2a. (267 aa)
LOC101173916Mothers against decapentaplegic homolog. (538 aa)
LOC101169146Muscleblind-like splicing regulator 1. (413 aa)
hlfHLF transcription factor, PAR bZIP family member b. (317 aa)
ENSORLP00000029960Ig-like domain-containing protein. (116 aa)
LOC101161235Troponin I4b, tandem duplicate 2. (180 aa)
mylpfMyosin light chain, phosphorylatable, fast skeletal muscle a. (297 aa)
noc3lNucleolar complex protein 3 homolog. (834 aa)
tcf21Transcription factor 21. (171 aa)
LOC101168331Uncharacterized protein. (312 aa)
bvesBlood vessel epicardial substance. (356 aa)
LOC101174373Myocyte enhancer factor 2d. (614 aa)
LOC101168870E1A binding protein p300 b. (2760 aa)
hsp90ab1Heat shock protein 90, alpha (cytosolic), class B member 1. (724 aa)
LOC105357454Myogenic factor. (245 aa)
kyKyphoscoliosis peptidase. (835 aa)
ENSORLP00000033705Spatacsin_C domain-containing protein. (1073 aa)
stac3SH3 and cysteine rich domain 3. (346 aa)
LOC101171215Troponin C type 1b (slow). (161 aa)
LOC101165037Muscleblind-like splicing regulator 2. (425 aa)
ENSORLP00000035594V-SNARE coiled-coil homology domain-containing protein. (113 aa)
gpcpd1Glycerophosphocholine phosphodiesterase 1. (667 aa)
LOC101157753Ankyrin repeat and SOCS box containing 2b. (581 aa)
LOC101173138Ankyrin repeat domain 33Ab. (448 aa)
cd164CD164 molecule. (176 aa)
LOC101160830Uncharacterized protein. (259 aa)
rb1Retinoblastoma 1. (916 aa)
LOC101156720R3H domain containing 1. (996 aa)
TCF24BHLH domain-containing protein. (173 aa)
LOC101165732Peptidase S72 domain-containing protein. (901 aa)
LOC101171576Multiple EGF-like-domains 11. (1085 aa)
gdf5Growth differentiation factor 5. (567 aa)
LOC101171064Growth differentiation factor 6a. (437 aa)
lamc3Laminin, gamma 3. (1645 aa)
ENSORLP00000039489Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (198 aa)
LOC101172899Troponin I4a. (178 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1782 aa)
LOC101174831Troponin C type 1a (slow). (161 aa)
LOC101172686Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (445 aa)
LOC101171509Uncharacterized protein. (1003 aa)
svilSupervillin a. (2193 aa)
LOC101163504Mothers against decapentaplegic homolog. (528 aa)
spegStriated muscle enriched protein kinase a. (3313 aa)
ENSORLP00000045591Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (130 aa)
myod1Myogenic factor. (297 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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