STRINGSTRING
crb2 crb2 LOC101158262 LOC101158262 fgf3 fgf3 eif2b1 eif2b1 notch1 notch1 LOC101157631 LOC101157631 LOC101170159 LOC101170159 H2L8H5_ORYLA H2L8H5_ORYLA LOC101167548 LOC101167548 pard3 pard3 ppp3r1 ppp3r1 LOC101157076 LOC101157076 NCSTN NCSTN leo1 leo1 ILK ILK LOC101172012 LOC101172012 H2LIM0_ORYLA H2LIM0_ORYLA dctn2 dctn2 gpr157 gpr157 LOC101159859 LOC101159859 mettl14 mettl14 fgf16 fgf16 LOC101171158 LOC101171158 LOC101160681 LOC101160681 lef1 lef1 mettl3 mettl3 sh3tc2 sh3tc2 sox9 sox9 LOC101170202 LOC101170202 TPPP TPPP LOC101165595 LOC101165595 LOC101157800 LOC101157800 crb1 crb1 LOC101164500 LOC101164500 wasf3 wasf3 H2LZ82_ORYLA H2LZ82_ORYLA adgrg6 adgrg6 H2M0K9_ORYLA H2M0K9_ORYLA ror1 ror1 sh3tc1 sh3tc1 LOC101160108 LOC101160108 shh shh cntn2 cntn2 dag1 dag1 aspa aspa dner dner eif2b5 eif2b5 dusp10 dusp10 fa2h fa2h LOC101156666 LOC101156666 LOC101165637 LOC101165637 smo smo egr2 egr2 H2MJT0_ORYLA H2MJT0_ORYLA gpr17 gpr17 LOC101169283 LOC101169283 eif2b3 eif2b3 eif2b4 eif2b4 ttc21b ttc21b cdh2 cdh2 LOC105357206 LOC105357206 phgdh phgdh LOC101164049 LOC101164049 cdk5 cdk5 prdm8 prdm8 ptprz1 ptprz1 LOC101157838 LOC101157838 abl2 abl2 phox2b phox2b Nf1 Nf1 plpp3 plpp3 metrn metrn nkx6-1 nkx6-1 LOC101168674 LOC101168674 LOC101171500 LOC101171500 LOC101160972 LOC101160972 LOC101157617 LOC101157617 LOC101164657 LOC101164657 LOC101165801 LOC101165801 ENSORLP00000029673 ENSORLP00000029673 Adgrg2 Adgrg2 ror2 ror2 nrros nrros PARD3 PARD3 ercc2 ercc2 eif2b2 eif2b2 CNP CNP LOC101166202 LOC101166202 sox10 sox10 ENSORLP00000034659 ENSORLP00000034659 nkx6-2 nkx6-2 mib1 mib1 LOC101166327 LOC101166327 cdkn2c cdkn2c LOC101157822 LOC101157822 LOC101165732 LOC101165732 LOC101159134 LOC101159134 fgf5 fgf5 abl1 abl1 LOC100125500 LOC100125500 cspg5 cspg5 LOC101171596 LOC101171596 fgf8 fgf8 itgb4 itgb4 LOC105358756 LOC105358756 LOC101162736 LOC101162736 ENSORLP00000045191 ENSORLP00000045191 pick1 pick1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crb2Uncharacterized protein. (1464 aa)
LOC101158262Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (921 aa)
fgf3Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (245 aa)
eif2b1Eukaryotic translation initiation factor 2B, subunit 1 alpha; Belongs to the eIF-2B alpha/beta/delta subunits family. (302 aa)
notch1Notch receptor 1b. (2507 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
LOC101170159Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (413 aa)
H2L8H5_ORYLAAdhesion G protein-coupled receptor G4b; Belongs to the G-protein coupled receptor 2 family. (428 aa)
LOC101167548Adhesion G protein-coupled receptor G4a; Belongs to the G-protein coupled receptor 2 family. (1208 aa)
pard3Par-3 family cell polarity regulator alpha, b. (1389 aa)
ppp3r1Uncharacterized protein. (170 aa)
LOC101157076Vitronectin b. (437 aa)
NCSTNNicastrin. (677 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (638 aa)
ILKIntegrin linked kinase. (452 aa)
LOC101172012Uncharacterized protein. (452 aa)
H2LIM0_ORYLAUncharacterized protein. (726 aa)
dctn2Dynactin 2 (p50). (404 aa)
gpr157G protein-coupled receptor 157. (349 aa)
LOC101159859Uncharacterized protein. (293 aa)
mettl14Methyltransferase like 14; Belongs to the MT-A70-like family. (455 aa)
fgf16Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (217 aa)
LOC101171158Tetraspanin. (219 aa)
LOC101160681WH2 domain-containing protein. (450 aa)
lef1Lymphoid enhancer-binding factor 1. (379 aa)
mettl3Methyltransferase like 3; Belongs to the MT-A70-like family. (584 aa)
sh3tc2SH3 domain and tetratricopeptide repeats 2. (1553 aa)
sox9HMG box domain-containing protein. (476 aa)
LOC101170202Vitronectin a. (554 aa)
TPPPTubulin polymerization promoting protein. (265 aa)
LOC101165595Zgc:109889. (553 aa)
LOC101157800Proteolipid protein 1b. (245 aa)
crb1Crumbs cell polarity complex component 1. (1325 aa)
LOC101164500PR domain containing 8. (514 aa)
wasf3WASP family member 3b. (486 aa)
H2LZ82_ORYLAUncharacterized protein. (708 aa)
adgrg6Adhesion G protein-coupled receptor G6; Belongs to the G-protein coupled receptor 2 family. (1190 aa)
H2M0K9_ORYLAUncharacterized protein. (561 aa)
ror1Receptor tyrosine kinase-like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (954 aa)
sh3tc1SH3 domain-containing protein. (1324 aa)
LOC101160108Zinc finger protein 16 like. (457 aa)
shhHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (414 aa)
cntn2Contactin 2. (1034 aa)
dag1Dystroglycan 1. (868 aa)
aspaAspartoacylase. (313 aa)
dnerDelta/notch-like EGF repeat containing. (757 aa)
eif2b5Eukaryotic translation initiation factor 2B, subunit 5 epsilon. (707 aa)
dusp10Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
fa2hFatty acid 2-hydroxylase; Catalyzes stereospecific hydroxylation of free fatty acids at the C-2 position to produce (R)-2-hydroxy fatty acids, which are building blocks of sphingolipids and glycosphingolipids common in neural tissue and epidermis. Plays an essential role in the synthesis of galactosphingolipids of the myelin sheath. Responsible for the synthesis of sphingolipids and glycosphingolipids involved in the formation of epidermal lamellar bodies critical for skin permeability barrier. Participates in the synthesis of glycosphingolipids and a fraction of type II wax diesters i [...] (381 aa)
LOC101156666Uncharacterized protein. (1426 aa)
LOC101165637Matrix-remodelling associated 8b. (443 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (828 aa)
egr2Early growth response 2b. (449 aa)
H2MJT0_ORYLAUncharacterized protein. (589 aa)
gpr17G protein-coupled receptor 17; Belongs to the G-protein coupled receptor 1 family. (334 aa)
LOC101169283Uncharacterized protein. (428 aa)
eif2b3Eukaryotic translation initiation factor 2B, subunit 3 gamma. (454 aa)
eif2b4Eukaryotic translation initiation factor 2B, subunit 4 delta; Belongs to the eIF-2B alpha/beta/delta subunits family. (532 aa)
ttc21bTetratricopeptide repeat domain 21B. (1321 aa)
cdh2Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (908 aa)
LOC105357206NK2 homeobox 2b. (252 aa)
phgdhD-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (577 aa)
LOC101164049Uncharacterized protein. (692 aa)
cdk5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
prdm8PR domain containing 8b. (564 aa)
ptprz1Protein tyrosine phosphatase receptor type Z1a. (1288 aa)
LOC101157838C1q domain-containing protein. (239 aa)
abl2Tyrosine-protein kinase. (1185 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
Nf1Uncharacterized protein. (506 aa)
plpp3Phospholipid phosphatase 3. (332 aa)
metrnMeteorin, glial cell differentiation regulator. (304 aa)
nkx6-1NK6 homeobox 1. (414 aa)
LOC101168674Uncharacterized protein. (179 aa)
LOC101171500Proteolipid protein 1a. (253 aa)
LOC101160972UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6. (381 aa)
LOC101157617Tetraspanin. (211 aa)
LOC101164657Neural_ProG_Cyt domain-containing protein. (635 aa)
LOC101165801NGFI-A binding protein 2 (EGR1 binding protein 2). (495 aa)
ENSORLP00000029673Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (183 aa)
Adgrg2Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (2051 aa)
ror2Receptor tyrosine kinase-like orphan receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily. (938 aa)
nrrosNegative regulator of reactive oxygen species. (682 aa)
PARD3Par-3 family cell polarity regulator. (1373 aa)
ercc2Excision repair cross-complementation group 2. (761 aa)
eif2b2Eukaryotic translation initiation factor 2B, subunit 2 beta; Belongs to the eIF-2B alpha/beta/delta subunits family. (355 aa)
CNP2',3'-cyclic nucleotide 3' phosphodiesterase. (635 aa)
LOC101166202ATP binding cassette subfamily D member 1. (750 aa)
sox10SRY-box containing gene 10b. (484 aa)
ENSORLP00000034659Reelin domain-containing protein. (259 aa)
nkx6-2NK6 homeobox 2. (284 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1081 aa)
LOC101166327Si:dkey-175m17.7. (881 aa)
cdkn2cCyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4). (168 aa)
LOC101157822NK2 homeobox 2a. (279 aa)
LOC101165732Peptidase S72 domain-containing protein. (901 aa)
LOC101159134Xenotropic and polytropic retrovirus receptor 1b. (687 aa)
fgf5Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (213 aa)
abl1Tyrosine-protein kinase. (1106 aa)
LOC100125500Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (430 aa)
cspg5Chondroitin sulfate proteoglycan 5a. (614 aa)
LOC101171596Notch receptor 1a. (2476 aa)
fgf8Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (214 aa)
itgb4Integrin beta. (1912 aa)
LOC105358756Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (476 aa)
LOC101162736Sox10a. (498 aa)
ENSORLP00000045191Tyrosine-protein phosphatase domain-containing protein. (175 aa)
pick1Protein interacting with prkca 1. (421 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.