STRINGSTRING
LOC105358811 LOC105358811 ENSORLP00000036166 ENSORLP00000036166 ENSORLP00000044829 ENSORLP00000044829 nkx2-5 nkx2-5 srf srf LOC101163415 LOC101163415 mical2 mical2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC105358811MADS-box domain-containing protein. (552 aa)
ENSORLP00000036166FAD_binding_3 domain-containing protein. (285 aa)
ENSORLP00000044829Calponin-homology (CH) domain-containing protein. (122 aa)
nkx2-5Homeobox domain-containing protein. (319 aa)
srfSerum response factor b. (611 aa)
LOC101163415Myocardin related transcription factor Aa. (1117 aa)
mical2Microtubule associated monooxygenase, calponin and LIM domain containing 2a. (1004 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.