STRINGSTRING
LOC101169362 LOC101169362 abhd12 abhd12 H2LIE7_ORYLA H2LIE7_ORYLA LOC101157444 LOC101157444 LOC101167360 LOC101167360 foxn4 foxn4 crb1 crb1 sdk1 sdk1 H2LZ82_ORYLA H2LZ82_ORYLA fjx1 fjx1 LOC101156666 LOC101156666 atoh7 atoh7 rp2 rp2 RS1 RS1 rtn4ip1 rtn4ip1 poc1b poc1b ahi1 ahi1 tspan12 tspan12 bves bves tatdn1 tatdn1 LOC101165970 LOC101165970 crb2 crb2 lhx1 lhx1 sdk2 sdk2 fat3 fat3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101169362Sidekick cell adhesion molecule 2a. (2155 aa)
abhd12Abhydrolase domain containing 12. (375 aa)
H2LIE7_ORYLAUncharacterized protein. (1651 aa)
LOC101157444Immunoglobulin like and fibronectin type III domain containing 1, tandem duplicate 3. (1275 aa)
LOC101167360Immunoglobulin superfamily member 22. (1490 aa)
foxn4Forkhead box N4. (516 aa)
crb1Crumbs cell polarity complex component 1. (1325 aa)
sdk1Sidekick cell adhesion molecule 1a. (2140 aa)
H2LZ82_ORYLAUncharacterized protein. (708 aa)
fjx1Four-jointed box kinase 1. (422 aa)
LOC101156666Uncharacterized protein. (1426 aa)
atoh7Atonal bHLH transcription factor 7. (142 aa)
rp2Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization. (366 aa)
RS1Retinoschisin 1. (253 aa)
rtn4ip1Reticulon 4 interacting protein 1. (402 aa)
poc1bPOC1 centriolar protein B. (519 aa)
ahi1Abelson helper integration site 1. (854 aa)
tspan12Tetraspanin. (330 aa)
bvesBlood vessel epicardial substance. (356 aa)
tatdn1TatD DNase domain containing 1. (314 aa)
LOC101165970Retinal homeobox gene 1. (369 aa)
crb2Uncharacterized protein. (1464 aa)
lhx1LIM homeobox 1a. (406 aa)
sdk2Sidekick cell adhesion molecule 2b. (2178 aa)
fat3FAT atypical cadherin 3a. (4612 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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