STRINGSTRING
ntrk3 ntrk3 LOC101175634 LOC101175634 LOC101155037 LOC101155037 H2LIM0_ORYLA H2LIM0_ORYLA ntrk2 ntrk2 agt agt LOC105356557 LOC105356557 pdgfa pdgfa ror1 ror1 LOC101171139 LOC101171139 unc5b unc5b LOC101165149 LOC101165149 sirt1 sirt1 pik3ap1 pik3ap1 dcn dcn LOC101165876 LOC101165876 LOC101173752 LOC101173752 wnt16 wnt16 fn1 fn1 ENSORLP00000026165 ENSORLP00000026165 pdgfb pdgfb ENSORLP00000027787 ENSORLP00000027787 ENSORLP00000029099 ENSORLP00000029099 ncf1 ncf1 ppard ppard ror2 ror2 hax1 hax1 UBE3A UBE3A LOC101170246 LOC101170246 LOC101167634 LOC101167634 ENSORLP00000034659 ENSORLP00000034659 pdgfc pdgfc LOC101167461 LOC101167461 LOC101168685 LOC101168685 LOC101172297 LOC101172297 ntrk1 ntrk1 MYOC MYOC ARHGAP8 ARHGAP8 mydgf mydgf lepa lepa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ntrk3Tyrosine-protein kinase receptor. (815 aa)
LOC101175634Myocilin. (570 aa)
LOC101155037Transforming growth factor beta; Belongs to the TGF-beta family. (420 aa)
H2LIM0_ORYLAUncharacterized protein. (726 aa)
ntrk2Tyrosine-protein kinase receptor. (745 aa)
agtAngiotensinogen; Belongs to the serpin family. (460 aa)
LOC105356557G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (393 aa)
pdgfaPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (227 aa)
ror1Receptor tyrosine kinase-like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (954 aa)
LOC101171139Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (199 aa)
unc5bUnc-5 netrin receptor B. (949 aa)
LOC101165149Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (510 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
pik3ap1Phosphoinositide-3-kinase adaptor protein 1. (915 aa)
dcnDecorin; May affect the rate of fibrils formation. (367 aa)
LOC101165876Ubiquitin protein ligase E3A. (814 aa)
LOC101173752IGv domain-containing protein. (224 aa)
wnt16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (349 aa)
fn1Fibronectin-1. (2503 aa)
ENSORLP00000026165Kringle domain-containing protein. (94 aa)
pdgfbPlatelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (553 aa)
ENSORLP00000027787Neurotrophic tyrosine kinase, receptor, type 2b. (433 aa)
ENSORLP00000029099Uncharacterized protein. (282 aa)
ncf1Neutrophil cytosolic factor 1. (421 aa)
ppardUncharacterized protein. (517 aa)
ror2Receptor tyrosine kinase-like orphan receptor 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily. (938 aa)
hax1HCLS1 associated protein X-1. (282 aa)
UBE3AUbiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (894 aa)
LOC101170246Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family. (617 aa)
LOC101167634Coagulation factor II thrombin receptor. (440 aa)
ENSORLP00000034659Reelin domain-containing protein. (259 aa)
pdgfcPlatelet derived growth factor c; Belongs to the PDGF/VEGF growth factor family. (342 aa)
LOC101167461NK3 homeobox 1. (188 aa)
LOC101168685Tyrosine-protein kinase receptor. (816 aa)
LOC101172297Uncharacterized protein. (488 aa)
ntrk1Tyrosine-protein kinase receptor. (689 aa)
MYOCMyocilin. (458 aa)
ARHGAP8Rho GTPase activating protein 8. (407 aa)
mydgfMyeloid-derived growth factor. (205 aa)
lepaLeptin-A; May function as part of a signaling pathway that acts to regulate the size of the body fat depot. (185 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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