(33 nodes) Regulation of calcium ion-dependent exocytosis network (Oryzias latipes)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2L484_ORYLA	C2 domain-containing protein. (240 aa)
	syt12	Synaptotagmin XII. (429 aa)
	LOC101175439	Double C2-like domains, alpha. (441 aa)
	LOC101156534	Synaptotagmin Vb. (447 aa)
	LOC101162836	Synaptotagmin Ib. (407 aa)
	1-sf	ZP domain-containing protein. (420 aa)
	H2M963_ORYLA	Uncharacterized protein. (343 aa)
	LOC101171486	Synaptotagmin IXb. (527 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	LOC101164943	Synaptotagmin XV. (429 aa)
	LOC101157206	Uncharacterized protein. (430 aa)
	LOC101167710	Uncharacterized protein. (821 aa)
	LOC101173012	Uncharacterized protein. (953 aa)
	syt1	Synaptotagmin Ia. (536 aa)
	ENSORLP00000029575	Synaptotagmin VIa. (547 aa)
	LOC101158431	Secretory carrier-associated membrane protein. (195 aa)
	LOC101166118	Synaptotagmin VIIb. (671 aa)
	LOC101171075	Secretory carrier-associated membrane protein. (230 aa)
	syt3	Synaptotagmin III. (561 aa)
	LOC101169108	Synaptotagmin VIIa. (742 aa)
	syt11	Synaptotagmin XIb. (467 aa)
	ENSORLP00000036347	C2 domain-containing protein. (108 aa)
	stxbp3	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (598 aa)
	ENSORLP00000039004	C2 domain-containing protein. (115 aa)
	syt4	Synaptotagmin IV. (469 aa)
	LOC101154838	Double C2-like domains, delta. (426 aa)
	LOC101162492	Synaptotagmin X. (551 aa)
	LOC111947345	CACN subunit beta associated regulatory protein b. (771 aa)
	LOC101161806	Synaptotagmin IIa. (432 aa)
	doc2b	Double C2-like domain-containing protein. (394 aa)
	ENSORLP00000041927	Rabphilin 3A homolog (mouse), a. (101 aa)
	LOC101174010	Synaptotagmin IXa. (562 aa)
	LOC111947167	C2 domain-containing protein. (257 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSORLP00000039004	H2L484_ORYLA	ENSORLP00000039004	ENSORLP00000000569	C2 domain-containing protein.	C2 domain-containing protein.	0.900
ENSORLP00000039004	H2M963_ORYLA	ENSORLP00000039004	ENSORLP00000015043	C2 domain-containing protein.	Uncharacterized protein.	0.896
ENSORLP00000041927	LOC101156534	ENSORLP00000041927	ENSORLP00000008623	Rabphilin 3A homolog (mouse), a.	Synaptotagmin Vb.	0.607
ENSORLP00000041927	LOC101162836	ENSORLP00000041927	ENSORLP00000011014	Rabphilin 3A homolog (mouse), a.	Synaptotagmin Ib.	0.607
ENSORLP00000041927	LOC101164943	ENSORLP00000041927	ENSORLP00000023441	Rabphilin 3A homolog (mouse), a.	Synaptotagmin XV.	0.637
ENSORLP00000041927	syt11	ENSORLP00000041927	ENSORLP00000035236	Rabphilin 3A homolog (mouse), a.	Synaptotagmin XIb.	0.608
H2L484_ORYLA	ENSORLP00000039004	ENSORLP00000000569	ENSORLP00000039004	C2 domain-containing protein.	C2 domain-containing protein.	0.900
H2L484_ORYLA	H2M963_ORYLA	ENSORLP00000000569	ENSORLP00000015043	C2 domain-containing protein.	Uncharacterized protein.	0.899
H2M963_ORYLA	ENSORLP00000039004	ENSORLP00000015043	ENSORLP00000039004	Uncharacterized protein.	C2 domain-containing protein.	0.896
H2M963_ORYLA	H2L484_ORYLA	ENSORLP00000015043	ENSORLP00000000569	Uncharacterized protein.	C2 domain-containing protein.	0.899
H2M963_ORYLA	LOC101154838	ENSORLP00000015043	ENSORLP00000039547	Uncharacterized protein.	Double C2-like domains, delta.	0.758
H2M963_ORYLA	LOC101167710	ENSORLP00000015043	ENSORLP00000027187	Uncharacterized protein.	Uncharacterized protein.	0.647
H2M963_ORYLA	LOC101175439	ENSORLP00000015043	ENSORLP00000007682	Uncharacterized protein.	Double C2-like domains, alpha.	0.729
H2M963_ORYLA	doc2b	ENSORLP00000015043	ENSORLP00000041807	Uncharacterized protein.	Double C2-like domain-containing protein.	0.803
LOC101154838	H2M963_ORYLA	ENSORLP00000039547	ENSORLP00000015043	Double C2-like domains, delta.	Uncharacterized protein.	0.758
LOC101156534	ENSORLP00000041927	ENSORLP00000008623	ENSORLP00000041927	Synaptotagmin Vb.	Rabphilin 3A homolog (mouse), a.	0.607
LOC101156534	LOC101171486	ENSORLP00000008623	ENSORLP00000015341	Synaptotagmin Vb.	Synaptotagmin IXb.	0.471
LOC101156534	LOC101174010	ENSORLP00000008623	ENSORLP00000044379	Synaptotagmin Vb.	Synaptotagmin IXa.	0.450
LOC101156534	LOC111947167	ENSORLP00000008623	ENSORLP00000045528	Synaptotagmin Vb.	C2 domain-containing protein.	0.617
LOC101156534	stxbp3	ENSORLP00000008623	ENSORLP00000036437	Synaptotagmin Vb.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.507