STRINGSTRING
LOC101170824 LOC101170824 NRTN NRTN ackr3 ackr3 six6 six6 egr2 egr2 fgfr1 fgfr1 LOC101162832 LOC101162832 dag1 dag1 six3 six3 kifbp kifbp adgrg6 adgrg6 edn1 edn1 LOC101165998 LOC101165998 LOC101157368 LOC101157368 LOC101175353 LOC101175353 ednra ednra LOC101164147 LOC101164147 fbxo45 fbxo45 H2LKK7_ORYLA H2LKK7_ORYLA LOC101169794 LOC101169794 LOC101172012 LOC101172012 slitrk6 slitrk6 dlx5 dlx5 ILK ILK dlx3 dlx3 LOC101160158 LOC101160158 LOC101165732 LOC101165732 serpine2 serpine2 six3-2 six3-2 LOC101172686 LOC101172686 LOC105358756 LOC105358756 phox2a phox2a LOC101161644 LOC101161644 LOC101170271 LOC101170271 LOC101174131 LOC101174131 LOC101167548 LOC101167548 H2L8H5_ORYLA H2L8H5_ORYLA vax1 vax1 sulf1 sulf1 vax2 vax2 LOC101161908 LOC101161908 mib1 mib1 Adgrg2 Adgrg2 ENSORLP00000029673 ENSORLP00000029673 ret ret lrig1 lrig1 LOC101159406 LOC101159406 neurog1 neurog1 rest rest phox2b phox2b chodl chodl
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101170824Uncharacterized protein. (867 aa)
NRTNNeurturin. (212 aa)
ackr3Chemokine (C-X-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (381 aa)
six6SIX homeobox 6a. (245 aa)
egr2Early growth response 2b. (449 aa)
fgfr1Fibroblast growth factor receptor. (833 aa)
LOC101162832Extracellular sulfatase. (885 aa)
dag1Dystroglycan 1. (868 aa)
six3Homeobox protein SIX3; Transcriptional regulator which can act as both a transcriptional repressor and activator by binding a ATTA homeodomain core recognition sequence on these target genes. During forebrain development represses WNT1 expression allowing zona limitans intrathalamica formation and thereby ensuring proper anterio-posterior patterning of the diencephalon and formation of the rostral diencephalon. Acts as a direct upstream activator of SHH expression in the rostral diencephalon ventral midline and that in turn SHH maintains its expression. In addition, Six3 activity is re [...] (272 aa)
kifbpKif1 binding protein. (638 aa)
adgrg6Adhesion G protein-coupled receptor G6; Belongs to the G-protein coupled receptor 2 family. (1190 aa)
edn1Endothelin 1. (220 aa)
LOC101165998Dorsal root ganglia homeobox. (203 aa)
LOC101157368Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (291 aa)
LOC101175353SIX homeobox 7. (259 aa)
ednraEndothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (439 aa)
LOC101164147Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (198 aa)
fbxo45F-box protein 45. (288 aa)
H2LKK7_ORYLATransmembrane protein 126A. (198 aa)
LOC101169794Ring finger protein 165a. (301 aa)
LOC101172012Uncharacterized protein. (452 aa)
slitrk6SLIT and NTRK-like family, member 6. (801 aa)
dlx5Distal-less homeobox 5a. (296 aa)
ILKIntegrin linked kinase. (452 aa)
dlx3Distal-less homeobox 3b. (278 aa)
LOC101160158Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (796 aa)
LOC101165732Peptidase S72 domain-containing protein. (901 aa)
serpine2Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (494 aa)
six3-2Homeobox protein SIX3. (323 aa)
LOC101172686Endothelin receptor type Ab; Belongs to the G-protein coupled receptor 1 family. (445 aa)
LOC105358756Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (476 aa)
phox2aPaired like homeobox 2A. (299 aa)
LOC101161644Ring finger protein 165b. (355 aa)
LOC101170271Nerve growth factor receptor a (TNFR superfamily, member 16). (389 aa)
LOC101174131IF rod domain-containing protein; Belongs to the intermediate filament family. (1194 aa)
LOC101167548Adhesion G protein-coupled receptor G4a; Belongs to the G-protein coupled receptor 2 family. (1208 aa)
H2L8H5_ORYLAAdhesion G protein-coupled receptor G4b; Belongs to the G-protein coupled receptor 2 family. (428 aa)
vax1Ventral anterior homeobox 1. (323 aa)
sulf1Sulfatase 1. (1151 aa)
vax2Ventral anterior homeobox 2. (306 aa)
LOC101161908T-box transcription factor 5a. (525 aa)
mib1Mindbomb E3 ubiquitin protein ligase 1. (1081 aa)
Adgrg2Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (2051 aa)
ENSORLP00000029673Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (183 aa)
retRet proto-oncogene receptor tyrosine kinase; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1144 aa)
lrig1Leucine-rich repeats and immunoglobulin-like domains 1. (1034 aa)
LOC101159406Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (789 aa)
neurog1Neurogenin 1. (195 aa)
restRE1-silencing transcription factor. (871 aa)
phox2bPaired like homeobox 2Bb. (285 aa)
chodlChondrolectin. (300 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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