23 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	park7	DJ-1. (189 aa)
	ADCYAP1	Adenylate cyclase activating polypeptide 1a. (200 aa)
	PCLO	Piccolo presynaptic cytomatrix protein b. (7617 aa)
	stxbp3	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (598 aa)
	snx19	Sorting nexin 19b. (950 aa)
	LOC101167694	Complexin 3b. (157 aa)
	vip	Vasoactive intestinal peptide. (180 aa)
	ENSORLP00000030507	Rap guanine nucleotide exchange factor (GEF) 4. (348 aa)
	LOC101174678	Uncharacterized protein. (537 aa)
	ghrh	Growth hormone releasing hormone. (141 aa)
	LOC101167824	Zgc:171558. (1002 aa)
	LOC101155978	Piccolo presynaptic cytomatrix protein a. (3918 aa)
	hnf1a	HNF1 homeobox a. (560 aa)
	aqp1	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (261 aa)
	GPR119	G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family. (378 aa)
	LOC101167158	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family. (430 aa)
	edn1	Endothelin 1. (220 aa)
	H2LYX4_ORYLA	Si:dkey-211g8.9. (257 aa)
	LOC101175016	Sorting nexin 19a. (878 aa)
	ccdc186	Si:ch211-225b10.4. (991 aa)
	hnf1b	HNF1 homeobox Ba. (555 aa)
	smpd3	Sphingomyelin phosphodiesterase 3, neutral. (716 aa)
	LOC101165591	Adenylate cyclase activating polypeptide 1b. (175 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADCYAP1	LOC101165591	ENSORLP00000039459	ENSORLP00000043322	Adenylate cyclase activating polypeptide 1a.	Adenylate cyclase activating polypeptide 1b.	0.903
GPR119	H2LYX4_ORYLA	ENSORLP00000019342	ENSORLP00000011345	G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family.	Si:dkey-211g8.9.	0.495
H2LYX4_ORYLA	GPR119	ENSORLP00000011345	ENSORLP00000019342	Si:dkey-211g8.9.	G protein-coupled receptor 119; Belongs to the G-protein coupled receptor 1 family.	0.495
LOC101165591	ADCYAP1	ENSORLP00000043322	ENSORLP00000039459	Adenylate cyclase activating polypeptide 1b.	Adenylate cyclase activating polypeptide 1a.	0.903
LOC101167158	edn1	ENSORLP00000014678	ENSORLP00000011633	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.	Endothelin 1.	0.472
LOC101167158	ghrh	ENSORLP00000014678	ENSORLP00000028148	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.	Growth hormone releasing hormone.	0.654
edn1	LOC101167158	ENSORLP00000011633	ENSORLP00000014678	Endothelin 1.	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.	0.472
ghrh	LOC101167158	ENSORLP00000028148	ENSORLP00000014678	Growth hormone releasing hormone.	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.	0.654
hnf1a	hnf1b	ENSORLP00000023669	ENSORLP00000005738	HNF1 homeobox a.	HNF1 homeobox Ba.	0.772
hnf1b	hnf1a	ENSORLP00000005738	ENSORLP00000023669	HNF1 homeobox Ba.	HNF1 homeobox a.	0.772