STRINGSTRING
LOC101159134 LOC101159134 LOC101174538 LOC101174538 LOC101171158 LOC101171158 nkx2-3 nkx2-3 gab3 gab3 LOC101168287 LOC101168287 casp8 casp8 sirt1 sirt1 LOC101164049 LOC101164049 Cebpa Cebpa LOC101157617 LOC101157617 vegfa vegfa LOC101156536 LOC101156536 socs1 socs1 nrros nrros NKX2-3 NKX2-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101159134Xenotropic and polytropic retrovirus receptor 1b. (687 aa)
LOC101174538Eukaryotic translation initiation factor 2-alpha kinase 1. (656 aa)
LOC101171158Tetraspanin. (219 aa)
nkx2-3NK2 homeobox 3. (341 aa)
gab3PH domain-containing protein. (558 aa)
LOC101168287Colony stimulating factor 1b (macrophage). (301 aa)
casp8Uncharacterized protein; Belongs to the peptidase C14A family. (481 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
LOC101164049Uncharacterized protein. (692 aa)
CebpaCCAAT enhancer binding protein alpha. (152 aa)
LOC101157617Tetraspanin. (211 aa)
vegfaVascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
LOC101156536CCAAT/enhancer binding protein (C/EBP) 1. (223 aa)
socs1Suppressor of cytokine signaling 1. (199 aa)
nrrosNegative regulator of reactive oxygen species. (682 aa)
NKX2-3NK2 homeobox 3. (351 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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