72 items (Oryzias latipes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2L7U6_ORYLA	Huntingtin interacting protein 1 related a. (289 aa)
	LOC101168704	C2 domain-containing protein. (239 aa)
	ap1b1	AP complex subunit beta. (978 aa)
	ENSORLP00000040714	Uncharacterized protein. (524 aa)
	LOC101169108	Synaptotagmin VIIa. (742 aa)
	LOC101172690	Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (521 aa)
	ENSORLP00000033797	Uncharacterized protein. (425 aa)
	cltc	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1695 aa)
	syt4	Synaptotagmin IV. (469 aa)
	LOC101158708	Zgc:194578. (919 aa)
	syt3	Synaptotagmin III. (561 aa)
	LOC101157906	Synaptosome associated protein 91b. (685 aa)
	LOC101156253	Target of myb1 membrane trafficking protein. (645 aa)
	LOC101166118	Synaptotagmin VIIb. (671 aa)
	nsg2	Neuronal vesicle trafficking associated 2. (201 aa)
	ENSORLP00000029575	Synaptotagmin VIa. (547 aa)
	syt1	Synaptotagmin Ia. (536 aa)
	LOC101164596	Si:ch211-200p22.4. (663 aa)
	TOM1L2	Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (536 aa)
	armc9	Armadillo repeat containing 9. (824 aa)
	LOC101157206	Uncharacterized protein. (430 aa)
	ENSORLP00000026063	Uncharacterized protein. (195 aa)
	clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (226 aa)
	lrrk2	Leucine-rich repeat kinase 2. (2241 aa)
	LOC101164943	Synaptotagmin XV. (429 aa)
	LOC101164872	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (920 aa)
	ldlrap1	Low density lipoprotein receptor adaptor protein 1b. (320 aa)
	hip1	Huntingtin interacting protein 1. (1099 aa)
	ENSORLP00000035005	Uncharacterized protein. (152 aa)
	tepsin	TEPSIN adaptor related protein complex 4 accessory protein. (590 aa)
	gak	Cyclin G associated kinase. (1301 aa)
	ENSORLP00000037090	Uncharacterized protein. (207 aa)
	cltb	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (228 aa)
	picalm	Phosphatidylinositol binding clathrin assembly protein b. (736 aa)
	LOC101174278	Low density lipoprotein receptor adaptor protein 1a. (294 aa)
	LOC101168623	Epsin 3a. (600 aa)
	ENSORLP00000034843	annotation not available (275 aa)
	LOC101162492	Synaptotagmin X. (551 aa)
	LOC101161806	Synaptotagmin IIa. (432 aa)
	LOC111947167	C2 domain-containing protein. (257 aa)
	LOC105358592	Uncharacterized protein. (441 aa)
	syt11	Synaptotagmin XIb. (467 aa)
	ap2a1	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (983 aa)
	LOC101166053	Synaptotagmin Va. (396 aa)
	NSG1	Neuronal vesicle trafficking associated 1. (147 aa)
	LOC101170496	Uncharacterized protein; Belongs to the TOM1 family. (492 aa)
	LOC101171688	AP complex subunit beta. (953 aa)
	sclt1	Sodium channel and clathrin linker 1. (685 aa)
	ap2m1	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (442 aa)
	LOC101157554	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	CLINT1	Clathrin interactor 1. (661 aa)
	Hip1r	I/LWEQ domain-containing protein. (342 aa)
	clhc1	TSNAXIP1_N domain-containing protein. (446 aa)
	LOC101174010	Synaptotagmin IXa. (562 aa)
	epn2	Epsin 2. (578 aa)
	LOC101167321	AP-1 complex subunit gamma. (800 aa)
	LOC101171486	Synaptotagmin IXb. (527 aa)
	LOC101167232	Epsin 1. (643 aa)
	H2M5H2_ORYLA	Stonin-1; May be involved in the endocytic machinery. (703 aa)
	gpr108	G protein-coupled receptor 108. (548 aa)
	LOC101162836	Synaptotagmin Ib. (407 aa)
	ap1g1	AP-1 complex subunit gamma. (830 aa)
	LOC101169791	Clathrin interactor 1a. (586 aa)
	ap2s1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	LOC101156534	Synaptotagmin Vb. (447 aa)
	dab2	DAB adaptor protein 2. (761 aa)
	cltcl1	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1658 aa)
	ap4b1	AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (806 aa)
	Snap91	ENTH domain-containing protein. (226 aa)
	LOC101156840	ENTH domain-containing protein. (572 aa)
	syt12	Synaptotagmin XII. (429 aa)
	dnajc6	DnaJ (Hsp40) homolog, subfamily C, member 6. (899 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLINT1	ENSORLP00000033797	ENSORLP00000042699	ENSORLP00000033797	Clathrin interactor 1.	Uncharacterized protein.	0.563
CLINT1	ENSORLP00000035005	ENSORLP00000042699	ENSORLP00000035005	Clathrin interactor 1.	Uncharacterized protein.	0.563
CLINT1	LOC101156840	ENSORLP00000042699	ENSORLP00000002357	Clathrin interactor 1.	ENTH domain-containing protein.	0.443
CLINT1	LOC101157554	ENSORLP00000042699	ENSORLP00000016578	Clathrin interactor 1.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.741
CLINT1	LOC101157906	ENSORLP00000042699	ENSORLP00000032631	Clathrin interactor 1.	Synaptosome associated protein 91b.	0.443
CLINT1	LOC101158708	ENSORLP00000042699	ENSORLP00000038200	Clathrin interactor 1.	Zgc:194578.	0.569
CLINT1	LOC101164596	ENSORLP00000042699	ENSORLP00000028286	Clathrin interactor 1.	Si:ch211-200p22.4.	0.443
CLINT1	LOC101164872	ENSORLP00000042699	ENSORLP00000022961	Clathrin interactor 1.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.588
CLINT1	LOC101167232	ENSORLP00000042699	ENSORLP00000014618	Clathrin interactor 1.	Epsin 1.	0.593
CLINT1	LOC101167321	ENSORLP00000042699	ENSORLP00000015421	Clathrin interactor 1.	AP-1 complex subunit gamma.	0.741
CLINT1	LOC101168623	ENSORLP00000042699	ENSORLP00000040124	Clathrin interactor 1.	Epsin 3a.	0.593
CLINT1	LOC101169791	ENSORLP00000042699	ENSORLP00000009346	Clathrin interactor 1.	Clathrin interactor 1a.	0.551
CLINT1	LOC101171688	ENSORLP00000042699	ENSORLP00000018149	Clathrin interactor 1.	AP complex subunit beta.	0.662
CLINT1	Snap91	ENSORLP00000042699	ENSORLP00000002587	Clathrin interactor 1.	ENTH domain-containing protein.	0.443
CLINT1	ap1b1	ENSORLP00000042699	ENSORLP00000035121	Clathrin interactor 1.	AP complex subunit beta.	0.662
CLINT1	ap1g1	ENSORLP00000042699	ENSORLP00000010019	Clathrin interactor 1.	AP-1 complex subunit gamma.	0.756
CLINT1	ap2a1	ENSORLP00000042699	ENSORLP00000021377	Clathrin interactor 1.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.766
CLINT1	ap2m1	ENSORLP00000042699	ENSORLP00000017769	Clathrin interactor 1.	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	0.702
CLINT1	ap2s1	ENSORLP00000042699	ENSORLP00000008681	Clathrin interactor 1.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.424
CLINT1	ap4b1	ENSORLP00000042699	ENSORLP00000002603	Clathrin interactor 1.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.664