STRINGSTRING
ccn1 ccn1 LOC101163577 LOC101163577 LOC101155815 LOC101155815 H2LWC6_ORYLA H2LWC6_ORYLA LOC101163987 LOC101163987 LOC101161926 LOC101161926 LOC101167327 LOC101167327 bmpr2 bmpr2 LOC101157631 LOC101157631 acvr2a acvr2a LOC105357487 LOC105357487 LOC101169384 LOC101169384 LOC101163346 LOC101163346 pkdcc pkdcc ENSORLP00000036355 ENSORLP00000036355 bmpr1b bmpr1b LOC101171650 LOC101171650 tgfb3 tgfb3 atraid atraid ano6 ano6 bmp4 bmp4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccn1Cellular communication network factor 1. (376 aa)
LOC101163577FAM20C golgi associated secretory pathway kinase a. (568 aa)
LOC101155815Transforming growth factor beta; Belongs to the TGF-beta family. (408 aa)
H2LWC6_ORYLAUncharacterized protein. (260 aa)
LOC101163987Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (530 aa)
LOC101161926Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (513 aa)
LOC101167327FAM20C golgi associated secretory pathway kinase. (554 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1056 aa)
LOC101157631Transforming growth factor beta; Belongs to the TGF-beta family. (444 aa)
acvr2aSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (524 aa)
LOC105357487Activin_recp domain-containing protein. (762 aa)
LOC101169384Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (523 aa)
LOC101163346Bone morphogenetic protein 16. (516 aa)
pkdccProtein kinase domain containing, cytoplasmic b. (473 aa)
ENSORLP00000036355Uncharacterized protein. (102 aa)
bmpr1bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
LOC101171650Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (514 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (405 aa)
atraidAll-trans retinoic acid-induced differentiation factor. (234 aa)
ano6Anoctamin. (924 aa)
bmp4Bone morphogenetic protein 4. (441 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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