STRINGSTRING
rhot2 rhot2 LOC101173532 LOC101173532 LOC101168687 LOC101168687 LOC101169126 LOC101169126 LOC101170189 LOC101170189 LOC101167651 LOC101167651 LOC101160205 LOC101160205 mul1 mul1 LOC101172049 LOC101172049 tomm70 tomm70 pink1 pink1 fundc1 fundc1 cfap70 cfap70 LOC101171386 LOC101171386 abcb6 abcb6 bnip3 bnip3 gdap1 gdap1 LOC101169311 LOC101169311
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rhot2Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (618 aa)
LOC101173532FUN14 domain containing 1. (152 aa)
LOC101168687Zgc:153993. (293 aa)
LOC101169126Zgc:73226. (181 aa)
LOC101170189Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (660 aa)
LOC101167651Mitochondrial E3 ubiquitin protein ligase 1a. (376 aa)
LOC101160205Zgc:109986. (313 aa)
mul1Mitochondrial E3 ubiquitin protein ligase 1b. (382 aa)
LOC101172049Translocase of outer mitochondrial membrane 20b. (146 aa)
tomm70Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (577 aa)
pink1PTEN induced kinase 1. (577 aa)
fundc1Uncharacterized protein. (165 aa)
cfap70Uncharacterized protein. (1054 aa)
LOC101171386Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (660 aa)
abcb6ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (850 aa)
bnip3BCL2 interacting protein 3. (193 aa)
gdap1Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily. (361 aa)
LOC101169311Translocase of outer mitochondrial membrane 20. (146 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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