(44 nodes) Cleavage furrow network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101167403	Si:ch1073-416j23.1. (641 aa)
	svil	Supervillin a. (2193 aa)
	LOC101164183	Dynactin 3 (p22). (242 aa)
	stambpl1	STAM binding protein-like 1. (447 aa)
	mastl	Microtubule associated serine/threonine kinase-like. (826 aa)
	ENSORLP00000041152	Uncharacterized protein. (75 aa)
	stambp	STAM binding protein b. (428 aa)
	LOC101175643	Uncharacterized protein. (638 aa)
	racgap1	Rac GTPase activating protein 1. (631 aa)
	ENSORLP00000037465	Uncharacterized protein. (548 aa)
	LOC101160178	Spire-type actin nucleation factor 1a. (789 aa)
	nf2	Neurofibromin 2a (merlin). (610 aa)
	LOC101174543	Uncharacterized protein. (733 aa)
	LOC110014564	LIM zinc-binding domain-containing protein. (378 aa)
	LOC101156656	LIM domain and actin binding 1a. (736 aa)
	rab11fip3	RAB11 family interacting protein 3 (class II). (1100 aa)
	rab21	RAB21, member RAS oncogene family. (220 aa)
	ENSORLP00000030876	LIM zinc-binding domain-containing protein. (1167 aa)
	ect2	Epithelial cell transforming 2. (1098 aa)
	SPIRE1	Spire type actin nucleation factor 1. (794 aa)
	ENSORLP00000025928	Uncharacterized protein. (166 aa)
	katnbl1	Katanin p80 subunit B-like 1. (303 aa)
	zfyve19	Zinc finger, FYVE domain containing 19. (427 aa)
	LOC101171748	RAB11 family interacting protein 4 (class II) a. (585 aa)
	LOC101169647	Katanin_con80 domain-containing protein. (308 aa)
	H2MN86_ORYLA	ADP-ribosylation factor 6b. (112 aa)
	LOC101170523	Citron rho-interacting serine/threonine kinase b. (1595 aa)
	wdr73	Uncharacterized protein. (389 aa)
	LOC101163320	LIM zinc-binding domain-containing protein. (639 aa)
	fsd1	Fibronectin type III and SPRY domain containing 1. (493 aa)
	LOC101174493	Proline-serine-threonine phosphatase interacting protein 1b. (436 aa)
	men1	Multiple endocrine neoplasia I. (691 aa)
	LOC101155268	Citron rho-interacting serine/threonine kinase a; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1952 aa)
	LOC101156493	Proline-serine-threonine phosphatase interacting protein 1a. (663 aa)
	H2LS44_ORYLA	EABR domain-containing protein. (218 aa)
	LOC101164848	Supervillin d. (1481 aa)
	cep55	Centrosomal protein 55 like. (499 aa)
	pkn2	Protein kinase N2. (975 aa)
	LOC101157973	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (333 aa)
	rab11fip4	RAB11 family interacting protein 4 (class II) b. (513 aa)
	LOC101162621	Neurofibromin 2b (merlin). (604 aa)
	plcd3	Phosphoinositide phospholipase C. (790 aa)
	LOC101173310	Zgc:63587; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (348 aa)
	LOC101166743	HP domain-containing protein. (1630 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2LS44_ORYLA	LOC101167403	ENSORLP00000008904	ENSORLP00000017788	EABR domain-containing protein.	Si:ch1073-416j23.1.	0.529
H2LS44_ORYLA	LOC101175643	ENSORLP00000008904	ENSORLP00000040081	EABR domain-containing protein.	Uncharacterized protein.	0.529
H2LS44_ORYLA	ect2	ENSORLP00000008904	ENSORLP00000029882	EABR domain-containing protein.	Epithelial cell transforming 2.	0.605
H2LS44_ORYLA	racgap1	ENSORLP00000008904	ENSORLP00000038548	EABR domain-containing protein.	Rac GTPase activating protein 1.	0.529
H2MN86_ORYLA	LOC101171748	ENSORLP00000020187	ENSORLP00000021353	ADP-ribosylation factor 6b.	RAB11 family interacting protein 4 (class II) a.	0.520
H2MN86_ORYLA	rab11fip3	ENSORLP00000020187	ENSORLP00000032913	ADP-ribosylation factor 6b.	RAB11 family interacting protein 3 (class II).	0.520
H2MN86_ORYLA	rab11fip4	ENSORLP00000020187	ENSORLP00000004431	ADP-ribosylation factor 6b.	RAB11 family interacting protein 4 (class II) b.	0.520
H2MN86_ORYLA	rab21	ENSORLP00000020187	ENSORLP00000031891	ADP-ribosylation factor 6b.	RAB21, member RAS oncogene family.	0.540
LOC101156493	LOC101174493	ENSORLP00000009974	ENSORLP00000015490	Proline-serine-threonine phosphatase interacting protein 1a.	Proline-serine-threonine phosphatase interacting protein 1b.	0.904
LOC101157973	LOC101164183	ENSORLP00000006087	ENSORLP00000042374	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Dynactin 3 (p22).	0.489
LOC101157973	LOC101173310	ENSORLP00000006087	ENSORLP00000003325	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Zgc:63587; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.544
LOC101157973	cep55	ENSORLP00000006087	ENSORLP00000006368	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	Centrosomal protein 55 like.	0.420
LOC101164183	LOC101157973	ENSORLP00000042374	ENSORLP00000006087	Dynactin 3 (p22).	Septin 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.489
LOC101164183	LOC101173310	ENSORLP00000042374	ENSORLP00000003325	Dynactin 3 (p22).	Zgc:63587; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.	0.489
LOC101167403	H2LS44_ORYLA	ENSORLP00000017788	ENSORLP00000008904	Si:ch1073-416j23.1.	EABR domain-containing protein.	0.529
LOC101167403	LOC101175643	ENSORLP00000017788	ENSORLP00000040081	Si:ch1073-416j23.1.	Uncharacterized protein.	0.551
LOC101167403	cep55	ENSORLP00000017788	ENSORLP00000006368	Si:ch1073-416j23.1.	Centrosomal protein 55 like.	0.581
LOC101167403	ect2	ENSORLP00000017788	ENSORLP00000029882	Si:ch1073-416j23.1.	Epithelial cell transforming 2.	0.891
LOC101167403	racgap1	ENSORLP00000017788	ENSORLP00000038548	Si:ch1073-416j23.1.	Rac GTPase activating protein 1.	0.554
LOC101171748	H2MN86_ORYLA	ENSORLP00000021353	ENSORLP00000020187	RAB11 family interacting protein 4 (class II) a.	ADP-ribosylation factor 6b.	0.520