STRINGSTRING
LOC101164385 LOC101164385 LOC101169480 LOC101169480 LOC101166491 LOC101166491 H2M6L1_ORYLA H2M6L1_ORYLA nr1h4 nr1h4 fh fh cln3 cln3 LOC101164549 LOC101164549 LOC101169237 LOC101169237 LOC101173126 LOC101173126 sirt4 sirt4 LOC101173120 LOC101173120 LOC101175554 LOC101175554 prkn prkn
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101164385Dopamine receptor D4; Belongs to the G-protein coupled receptor 1 family. (383 aa)
LOC101169480Amino_oxidase domain-containing protein. (508 aa)
LOC101166491Amino_oxidase domain-containing protein. (464 aa)
H2M6L1_ORYLASi:ch73-71c20.5. (150 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (485 aa)
fhFumarate hydratase. (499 aa)
cln3Battenin. (437 aa)
LOC101164549ATCAY kinesin light chain interacting caytaxin a. (369 aa)
LOC101169237ATCAY kinesin light chain interacting caytaxin b. (305 aa)
LOC101173126Dopamine receptor D4a; Belongs to the G-protein coupled receptor 1 family. (382 aa)
sirt4NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. (311 aa)
LOC101173120G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (390 aa)
LOC101175554PNKD metallo-beta-lactamase domain containing. (360 aa)
prknE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (466 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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