STRINGSTRING
H2MBB3_ORYLA H2MBB3_ORYLA LOC101158990 LOC101158990 LOC101161673 LOC101161673 LOC101169638 LOC101169638 cd36 cd36 ldlrap1 ldlrap1 scarb1 scarb1 LOC101156458 LOC101156458
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2MBB3_ORYLAVitellogenin domain-containing protein. (793 aa)
LOC101158990Apolipoprotein Bb, tandem duplicate 2. (2459 aa)
LOC101161673Apolipoprotein Eb. (265 aa)
LOC101169638Uncharacterized protein. (190 aa)
cd36CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. (466 aa)
ldlrap1Low density lipoprotein receptor adaptor protein 1b. (320 aa)
scarb1Scavenger receptor class B, member 1; Belongs to the CD36 family. (532 aa)
LOC101156458Apolipoprotein Ba. (4366 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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