STRINGSTRING
lrrk2 lrrk2 LOC101166399 LOC101166399 LOC101165876 LOC101165876 LOC101161673 LOC101161673 UBE3A UBE3A c5h12orf10 c5h12orf10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrk2Leucine-rich repeat kinase 2. (2241 aa)
LOC101166399Apolipoprotein Ea. (262 aa)
LOC101165876Ubiquitin protein ligase E3A. (814 aa)
LOC101161673Apolipoprotein Eb. (265 aa)
UBE3AUbiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (894 aa)
c5h12orf10Melanocyte proliferating gene 1. (396 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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