(19 nodes) Post-anal tail morphogenesis network (Oryzias latipes)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sfrp2	Secreted frizzled-related protein 2. (290 aa)
	palb2	PALB2_WD40 domain-containing protein. (1311 aa)
	wnt5b	Protein Wnt-5b; Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters (By similarity). (436 aa)
	tll1	Metalloendopeptidase. (1023 aa)
	LOC101160003	Mothers against decapentaplegic homolog. (464 aa)
	LOC101161906	Transmembrane p24 trafficking protein 2. (207 aa)
	LOC101171501	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (365 aa)
	sp5	Sp5 transcription factor a. (371 aa)
	cdh2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (908 aa)
	fgfr1	Fibroblast growth factor receptor. (833 aa)
	me-t	Me-Tam. (419 aa)
	LOC100125511	Metalloendopeptidase. (970 aa)
	LOC101171428	FZ domain-containing protein. (337 aa)
	hes7	BHLH domain-containing protein. (268 aa)
	LOC101160069	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (448 aa)
	LOC101171257	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (343 aa)
	VANGL2	Vang-like protein. (525 aa)
	bcl9l	Bcl9 like. (1447 aa)
	LOC101158262	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (921 aa)

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101158262	cdh2	ENSORLP00000000094	ENSORLP00000021380	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.901
LOC101160069	LOC101171257	ENSORLP00000011063	ENSORLP00000009584	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.488
LOC101160069	LOC101171428	ENSORLP00000011063	ENSORLP00000013980	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	FZ domain-containing protein.	0.824
LOC101160069	LOC101171501	ENSORLP00000011063	ENSORLP00000027004	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.488
LOC101160069	VANGL2	ENSORLP00000011063	ENSORLP00000003569	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Vang-like protein.	0.600
LOC101160069	sfrp2	ENSORLP00000011063	ENSORLP00000010461	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.824
LOC101160069	wnt5b	ENSORLP00000011063	ENSORLP00000032981	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt-5b; Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters (By similarity).	0.901
LOC101171257	LOC101160069	ENSORLP00000009584	ENSORLP00000011063	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.488
LOC101171257	LOC101171428	ENSORLP00000009584	ENSORLP00000013980	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	FZ domain-containing protein.	0.520
LOC101171257	sfrp2	ENSORLP00000009584	ENSORLP00000010461	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.424
LOC101171428	LOC101160069	ENSORLP00000013980	ENSORLP00000011063	FZ domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.824
LOC101171428	LOC101171257	ENSORLP00000013980	ENSORLP00000009584	FZ domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.520
LOC101171428	LOC101171501	ENSORLP00000013980	ENSORLP00000027004	FZ domain-containing protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.789
LOC101171428	VANGL2	ENSORLP00000013980	ENSORLP00000003569	FZ domain-containing protein.	Vang-like protein.	0.572
LOC101171428	wnt5b	ENSORLP00000013980	ENSORLP00000032981	FZ domain-containing protein.	Protein Wnt-5b; Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters (By similarity).	0.864
LOC101171501	LOC101160069	ENSORLP00000027004	ENSORLP00000011063	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.488
LOC101171501	LOC101171428	ENSORLP00000027004	ENSORLP00000013980	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	FZ domain-containing protein.	0.789
LOC101171501	sfrp2	ENSORLP00000027004	ENSORLP00000010461	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Secreted frizzled-related protein 2.	0.789
VANGL2	LOC101160069	ENSORLP00000003569	ENSORLP00000011063	Vang-like protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.600
VANGL2	LOC101171428	ENSORLP00000003569	ENSORLP00000013980	Vang-like protein.	FZ domain-containing protein.	0.572