STRINGSTRING
chek1 chek1 exosc10 exosc10 dot1l dot1l glmn glmn brca1 brca1 rrp8 rrp8 vps72 vps72 lmnb2 lmnb2 LOC101160197 LOC101160197 LOC101162834 LOC101162834 LOC101166735 LOC101166735 hells hells LOC101170450 LOC101170450 smyd5 smyd5 pole3 pole3 H2L452_ORYLA H2L452_ORYLA LOC101167186 LOC101167186 Arid4a Arid4a fam172a fam172a LOC101160344 LOC101160344 LOC101161541 LOC101161541 LOC101175080 LOC101175080 nrm nrm arid4b arid4b ythdc1 ythdc1 LOC101155422 LOC101155422 tdg tdg mphosph8 mphosph8 ezh1 ezh1 bend3 bend3 rb1 rb1 bahd1 bahd1 LOC101169900 LOC101169900 rbm15b rbm15b znf335 znf335 LOC101168604 LOC101168604 LOC101168266 LOC101168266 LOC101166715 LOC101166715 rlim rlim dnmt1 dnmt1 PCGF3 PCGF3 lrif1 lrif1 LOC101168870 LOC101168870 hat1 hat1 ezh2 ezh2 LOC101171458 LOC101171458 ppm1d ppm1d ENSORLP00000027000 ENSORLP00000027000 LOC101172482 LOC101172482 Rif1 Rif1 H2MVX9_ORYLA H2MVX9_ORYLA gsk3b gsk3b lmna lmna LOC101163357 LOC101163357 prmt7 prmt7 sirt6 sirt6 sirt1 sirt1 cenpv cenpv H2M6M6_ORYLA H2M6M6_ORYLA dicer1 dicer1 LOC101168782 LOC101168782 H2M348_ORYLA H2M348_ORYLA LOC101156348 LOC101156348 LOC101164979 LOC101164979 LOC101160250 LOC101160250 LOC101157282 LOC101157282 morc2 morc2 prdm14 prdm14 KDM1B KDM1B H2LSI7_ORYLA H2LSI7_ORYLA LOC101168720 LOC101168720 rbm15 rbm15 znfx1 znfx1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
chek1Checkpoint kinase 1; Belongs to the protein kinase superfamily. (454 aa)
exosc10Exosome component 10. (891 aa)
dot1lHistone-lysine N-methyltransferase, H3 lysine-79 specific. (1578 aa)
glmnGlomulin, FKBP associated protein a. (588 aa)
brca1Uncharacterized protein. (1292 aa)
rrp8Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (569 aa)
vps72Vacuolar protein sorting 72 homolog a. (361 aa)
lmnb2Lamin B2; Belongs to the intermediate filament family. (579 aa)
LOC101160197E1A binding protein p300 a. (2781 aa)
LOC101162834Thymine DNA glycosylase, tandem duplicate 2. (504 aa)
LOC101166735H2A histone family, member Y2. (411 aa)
hellsHelicase, lymphoid specific. (853 aa)
LOC101170450H2A histone family, member Y; Belongs to the histone H2A family. (369 aa)
smyd5SMYD family member 5. (418 aa)
pole3CBFD_NFYB_HMF domain-containing protein. (148 aa)
H2L452_ORYLAUncharacterized protein. (824 aa)
LOC101167186Methyl CpG binding protein 2. (1004 aa)
Arid4aTudor domain-containing protein. (324 aa)
fam172aFamily with sequence similarity 172 member A. (439 aa)
LOC101160344Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (480 aa)
LOC101161541Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (695 aa)
LOC101175080DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1430 aa)
nrmNurim. (277 aa)
arid4bTranslocase of outer mitochondrial membrane 20. (1289 aa)
ythdc1YTH domain containing 1. (695 aa)
LOC101155422Uncharacterized protein. (115 aa)
tdgThymine DNA glycosylase, tandem duplicate 1. (595 aa)
mphosph8Uncharacterized protein. (867 aa)
ezh1Uncharacterized protein. (807 aa)
bend3Uncharacterized protein. (747 aa)
rb1Retinoblastoma 1. (916 aa)
bahd1Bromo adjacent homology domain containing 1. (818 aa)
LOC101169900SPT2 chromatin protein domain containing 1. (663 aa)
rbm15bRNA binding motif protein 15B. (830 aa)
znf335Zinc finger protein 335. (1618 aa)
LOC101168604Lamin L3; Belongs to the intermediate filament family. (704 aa)
LOC101168266Methyl-CpG binding domain protein 2. (386 aa)
LOC101166715Uncharacterized protein; Belongs to the potassium channel family. (719 aa)
rlimRing finger protein, LIM domain interacting. (651 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1496 aa)
PCGF3Polycomb group ring finger 3. (318 aa)
lrif1Uncharacterized protein. (521 aa)
LOC101168870E1A binding protein p300 b. (2760 aa)
hat1Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. (408 aa)
ezh2Uncharacterized protein. (775 aa)
LOC101171458BAH domain-containing protein. (892 aa)
ppm1dProtein phosphatase, Mg2+/Mn2+ dependent, 1Da. (544 aa)
ENSORLP00000027000Uncharacterized protein. (188 aa)
LOC101172482Methyl-CpG binding domain protein 3a. (350 aa)
Rif1Uncharacterized protein. (1520 aa)
H2MVX9_ORYLACCCTC-binding factor (zinc finger protein). (374 aa)
gsk3bGlycogen synthase kinase 3 beta, genome duplicate a. (216 aa)
lmnaLamin A; Belongs to the intermediate filament family. (634 aa)
LOC101163357Uncharacterized protein. (244 aa)
prmt7Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (685 aa)
sirt6Sirtuin 6. (347 aa)
sirt1Deacetylase sirtuin-type domain-containing protein. (680 aa)
cenpvCentromere protein V. (133 aa)
H2M6M6_ORYLAStructural maintenance of chromosomes flexible hinge domain containing 1. (1384 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1888 aa)
LOC101168782Uncharacterized protein. (265 aa)
H2M348_ORYLATudor-knot domain-containing protein. (682 aa)
LOC101156348Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (566 aa)
LOC101164979Transcription activation suppressor b. (1819 aa)
LOC101160250Uncharacterized protein; Belongs to the intermediate filament family. (640 aa)
LOC101157282CCCTC-binding factor (zinc finger protein). (753 aa)
morc2MORC family CW-type zinc finger 2. (847 aa)
prdm14PR domain containing 14. (585 aa)
KDM1BLysine demethylase 1B. (829 aa)
H2LSI7_ORYLABmi1 polycomb ring finger oncogene 1a. (332 aa)
LOC101168720Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily. (438 aa)
rbm15RNA binding motif protein 15. (845 aa)
znfx1Zinc finger, NFX1-type containing 1. (1904 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.