STRINGSTRING
cep104 cep104 LOC101175044 LOC101175044 LOC101174559 LOC101174559 sesn1 sesn1 egln1 egln1 LOC101158865 LOC101158865 aars2 aars2 ENSORLP00000042136 ENSORLP00000042136 LOC101165247 LOC101165247 ogfod3 ogfod3 yars2 yars2 LOC101164580 LOC101164580 casr casr slc19a1 slc19a1 p3h2 p3h2 shmt2 shmt2 hlcs hlcs pigs pigs pc pc LOC101155030 LOC101155030 gb gb LOC101157281 LOC101157281 p4ha3 p4ha3 SHMT2 SHMT2 p3h4 p3h4 ubr2 ubr2 dbt dbt H2LCY1_ORYLA H2LCY1_ORYLA LOC101162627 LOC101162627 p4htm p4htm LOC101163960 LOC101163960 scly scly LOC101156095 LOC101156095 LOC101165147 LOC101165147 tm4sf5 tm4sf5 kars1 kars1 LOC101161142 LOC101161142 LOC101175017 LOC101175017 slc46a1 slc46a1 LOC101158747 LOC101158747 LOC101162811 LOC101162811 Cad Cad ogfod1 ogfod1 LOC101161805 LOC101161805 otc otc LOC101174852 LOC101174852 uros uros gclc gclc plod2 plod2 LOC101158631 LOC101158631 scp2 scp2 DDAH1 DDAH1 LOC101155285 LOC101155285 LOC101171932 LOC101171932 nr1h4 nr1h4 grin3b grin3b glra1 glra1 crtap crtap p3h1 p3h1 p3h3 p3h3 gad2 gad2 mettl26 mettl26 aars1 aars1 P3H4 P3H4 shmt1 shmt1 podn podn LOC101154926 LOC101154926 LOC101172363 LOC101172363 tat tat LOC101162880 LOC101162880 cps1 cps1 ogfod2 ogfod2 UBR1 UBR1 LOC105357196 LOC105357196 glra2 glra2 gpr143 gpr143 egln3 egln3 ftcd ftcd nags nags plod1 plod1 p4ha2 p4ha2 GLRB GLRB phyh phyh LOC101158692 LOC101158692 GRIN3A GRIN3A pam pam id3 id3 LOC101163589 LOC101163589 gnmt gnmt LOC101172157 LOC101172157 gldc gldc ppard ppard alox5ap alox5ap LOC105356312 LOC105356312 LOC101170524 LOC101170524 Plod3 Plod3 gb-4 gb-4 p4ha1 p4ha1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cep104Centrosomal protein 104. (914 aa)
LOC101175044Zgc:172079. (202 aa)
LOC101174559Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (585 aa)
sesn1Sestrin 1. (545 aa)
egln1Egl-9 family hypoxia-inducible factor 1a. (385 aa)
LOC101158865Dimethylarginine dimethylaminohydrolase 2. (290 aa)
aars2Alanyl-tRNA synthetase 2, mitochondrial (putative); Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (999 aa)
ENSORLP00000042136Uncharacterized protein. (205 aa)
LOC101165247Si:ch211-137i24.10. (191 aa)
ogfod3Urotensin-2 receptor 2. (315 aa)
yars2Tyrosine--tRNA ligase. (473 aa)
LOC101164580Egl-9 family hypoxia-inducible factor 2. (539 aa)
casrCalcium-sensing receptor. (924 aa)
slc19a1Solute carrier family 19 member 1. (496 aa)
p3h2Prolyl 3-hydroxylase 2. (679 aa)
shmt2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (501 aa)
hlcsHolocarboxylase synthetase. (916 aa)
pigsPhosphatidylinositol glycan anchor biosynthesis, class S. (562 aa)
pcPyruvate carboxylase b. (1048 aa)
LOC101155030Hemoglobin embryonic subunit alpha-like. (144 aa)
gbHemoglobin embryonic subunit alpha; Involved in oxygen transport from gills to the various peripheral tissues. (144 aa)
LOC101157281Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (542 aa)
p4ha3Prolyl 4-hydroxylase, alpha polypeptide III. (542 aa)
SHMT2Serine hydroxymethyltransferase 2. (528 aa)
p3h4Prolyl 3-hydroxylase family member 4 (non-enzymatic). (421 aa)
ubr2E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1798 aa)
dbtDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. (458 aa)
H2LCY1_ORYLAUncharacterized protein. (123 aa)
LOC101162627G protein-coupled receptor, class C, group 6, member A. (934 aa)
p4htmProlyl 4-hydroxylase, transmembrane (endoplasmic reticulum). (493 aa)
LOC101163960Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)
sclySelenocysteine lyase. (407 aa)
LOC101156095Glycine receptor, alpha 4a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (455 aa)
LOC101165147Zgc:103625. (205 aa)
tm4sf5Transmembrane 4 L six family member 5. (203 aa)
kars1Lysine--tRNA ligase. (611 aa)
LOC101161142Vomeronasal type-1 receptor. (313 aa)
LOC101175017Si:ch211-137i24.10. (190 aa)
slc46a1Solute carrier family 46 member 1. (493 aa)
LOC101158747LRAT domain-containing protein. (213 aa)
LOC101162811Lecithin retinol acyltransferase a. (228 aa)
CadCarbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase. (987 aa)
ogfod12-oxoglutarate and iron-dependent oxygenase domain containing 1. (570 aa)
LOC101161805Zgc:158254. (504 aa)
otcOrnithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (357 aa)
LOC101174852Glycine receptor, alpha 4b; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (479 aa)
urosUroporphyrinogen III synthase. (236 aa)
gclcGlutamate-cysteine ligase, catalytic subunit. (592 aa)
plod2Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. (756 aa)
LOC101158631Cellular retinoic acid binding protein 2, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (142 aa)
scp2Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (540 aa)
DDAH1Dimethylarginine dimethylaminohydrolase 1. (283 aa)
LOC101155285Sestrin 2. (559 aa)
LOC101171932Folate receptor. (242 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (485 aa)
grin3bGlutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1333 aa)
glra1Glycine receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (464 aa)
crtapCartilage associated protein. (396 aa)
p3h1Prolyl 3-hydroxylase 1. (1026 aa)
p3h3Prolyl 3-hydroxylase 3. (732 aa)
gad2Glutamate decarboxylase 2. (586 aa)
mettl26Methyltransferase like 26. (212 aa)
aars1Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (966 aa)
P3H4Prolyl 3-hydroxylase family member 4 (non-enzymatic). (424 aa)
shmt1Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (482 aa)
podnPodocan. (614 aa)
LOC101154926Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (498 aa)
LOC101172363Uncharacterized protein. (550 aa)
tatTyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (475 aa)
LOC101162880Zgc:153901. (407 aa)
cps1Carbamoyl-phosphate synthase 1, mitochondrial. (1515 aa)
ogfod22-oxoglutarate and iron-dependent oxygenase domain containing 2. (350 aa)
UBR1E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1737 aa)
LOC105357196G_PROTEIN_RECEP_F3_4 domain-containing protein. (878 aa)
glra2Glycine receptor, alpha 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (453 aa)
gpr143G protein-coupled receptor 143. (436 aa)
egln3Egl-9 family hypoxia-inducible factor 3. (252 aa)
ftcdFormimidoyltransferase cyclodeaminase. (732 aa)
nagsN-acetylglutamate synthase. (525 aa)
plod1Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. (733 aa)
p4ha2Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide 2. (534 aa)
GLRBGlycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (518 aa)
phyhPhytanoyl-CoA 2-hydroxylase. (333 aa)
LOC101158692Si:dkey-30c15.2. (351 aa)
GRIN3AGlutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1216 aa)
pamPeptidylglycine alpha-amidating monooxygenase. (1013 aa)
id3Inhibitor of DNA binding 3. (118 aa)
LOC101163589Cellular retinoic acid binding protein 2, b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (142 aa)
gnmtGlycine N-methyltransferase. (295 aa)
LOC101172157Cellular retinoic acid binding protein 1a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)
gldcGlycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. (1031 aa)
ppardUncharacterized protein. (517 aa)
alox5apArachidonate 5-lipoxygenase-activating protein. (157 aa)
LOC105356312Lecithin retinol acyltransferase b, tandem duplicate 1. (231 aa)
LOC101170524Si:zfos-80g12.1. (445 aa)
Plod3Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. (364 aa)
gb-4GLOBIN domain-containing protein; Belongs to the globin family. (219 aa)
p4ha1Prolyl 4-hydroxylase, alpha polypeptide I b. (545 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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