STRINGSTRING
aldh1l2 aldh1l2 GOT1 GOT1 adhfe1 adhfe1 got1 got1 got2 got2 LOC101174660 LOC101174660 acot8 acot8 ACSF3 ACSF3 gad2 gad2 QPRT QPRT LOC111947394 LOC111947394 ddo ddo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
aldh1l2Aldehyde dehydrogenase 1 family, member L2; Belongs to the aldehyde dehydrogenase family. (988 aa)
GOT1Aspartate aminotransferase. (410 aa)
adhfe1Alcohol dehydrogenase iron containing 1. (466 aa)
got1Aspartate aminotransferase. (449 aa)
got2Aspartate aminotransferase. (428 aa)
LOC10117466010-formyltetrahydrofolate dehydrogenase; In the C-terminal section; belongs to the aldehyde dehydrogenase family. ALDH1L subfamily. (902 aa)
acot8Acyl-CoA thioesterase 8. (337 aa)
ACSF3Acyl-CoA synthetase family member 3. (627 aa)
gad2Glutamate decarboxylase 2. (586 aa)
QPRTNicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. (298 aa)
LOC111947394Uncharacterized protein. (252 aa)
ddoZgc:172341. (338 aa)
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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